Symbol Alias Description Function Gene_Set Species Literature_Name Literature_Link KEGG_ID KEGG_Name Gene_ID IL2RB IL-2R Subunit Beta Interleukin 2 Receptor Subunit Beta Receptor for interleukin-2. This beta subunit is involved in receptor mediated endocytosis and transduces the mitogenic signals of IL2. Probably in association with IL15RA, involved in the stimulation of neutrophil phagocytosis by IL15. others Homo sapiens Defective CD8 Signaling Pathways Delay Rejection in Older Recipients 10.1097/TP.0000000000000886 hsa04060 Cytokine-cytokine receptor interaction 3560 PSAT1 PSA Phosphoserine Aminotransferase 1 Catalyzes the reversible conversion of 3-phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4-phosphonooxybutanoate to phosphohydroxythreonine. others Homo sapiens Serine Metabolism Controls Dental Pulp Stem Cell Aging by Regulating the DNA Methylation of p16 10.1177/0022034520958374 hsa00260 hsa00260 Glycine, serine and threonine metabolism 29968 A2M FWP007; S863-7; CPAMD5 alpha-2-macroglobulin Alpha-2-macroglobulin is a serum pan-protease inhibitor that has been implicated in Alzheimer disease (AD) based on its ability to mediate the clearance and degradation of A beta, the major component of beta-amyloid deposits. others Homo sapiens Alpha-2 Macroglobulin Is Genetically Associated With Alzheimer Disease 10.1038/1243 unknown Unknown 2 AARS1 AlaRS Alanyl-TRNA Synthetase 1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala) (PubMed:27622773, PubMed:27911835, PubMed:28493438). Also edits incorrectly charged tRNA(Ala) via its editing domain. loss of proteostasis Homo sapiens Altered Sensory Neuron Development in CMT2D Mice Is Site-Specific and Linked to Increased GlyRS Levels 10.3389/fncel.2020.00232 hsa00970 Aminoacyl-tRNA biosynthesis 16 ABL1 JTK7; c-ABL ABL proto-oncogene 1, non-receptor tyrosine kinase c-Abl stimulates p73-mediated transactivation and apoptosis. This regulation of p73 by c-Abl in response to DNA damage is also demonstrated by a failure of ionizing-radiation-induced apoptosis after disruption of the c-Abl-p73 interaction. genomic instability Homo sapiens p73 Is Regulated by Tyrosine Kinase c-Abl in the Apoptotic Response to DNA Damage 10.1038/21704 hsa04110 Cell cycle 25 ADCY1 ATP Pyrophosphate-Lyase 1 Adenylate cyclase type 1 Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. Mediates responses to increased cellular Ca2+/calmodulin levels. May be involved in regulatory processes in the central nervous system. May play a role in memory and learning. Plays a role in the regulation of the circadian rhythm of daytime contrast sensitivity probably by modulating the rhythmic synthesis of cyclic AMP in the retina. altered intercellular communication Homo sapiens Expression and regulation of adenylyl cyclase isoforms in the human adrenal gland 10.1210/jcem.86.9.7837 hsa04211 Longevity regulating pathway 107 ADCY2 ATP Pyrophosphate-Lyase 2 Adenylate cyclase type 2 Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. Down-stream signaling cascades mediate changes in gene expression patterns and lead to increased IL6 production. Functions in signaling cascades downstream of the muscarinic acetylcholine receptors. altered intercellular communication Homo sapiens Expression and regulation of adenylyl cyclase isoforms in the human adrenal gland 10.1210/jcem.86.9.7837 hsa04211 Longevity regulating pathway 108 ADCY3 ATP Pyrophosphate-Lyase 3 Adenylate cyclase type 3 Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. Participates in signaling cascades triggered by odorant receptors via its function in cAMP biosynthesis. Required for the perception of odorants. Required for normal sperm motility and normal male fertility. Plays a role in regulating insulin levels and body fat accumulation in response to a high fat diet. altered intercellular communication Homo sapiens Expression and regulation of adenylyl cyclase isoforms in the human adrenal gland 10.1210/jcem.86.9.7837 hsa04211 Longevity regulating pathway 109 ADCY4 ATP Pyrophosphate-Lyase 4 Adenylate cyclase type 4 Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. altered intercellular communication Homo sapiens Characterization of the human adenylyl cyclase gene family: cDNA, gene structure, and tissue distribution of the nine isoforms 10.1081/rrs-120014589 hsa04211 Longevity regulating pathway 196883 ADCY5 ATP Pyrophosphate-Lyase 5 adenylate cyclase 5 Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. Mediates signaling downstream of ADRB1. Regulates the increase of free cytosolic Ca2+?in response to increased blood glucose levels and contributes to the regulation of Ca2+-dependent insulin secretion. altered intercellular communication Homo sapiens Adenylyl Cyclase 5 Regulation by Gβγ Involves Isoform-Specific Use of Multiple Interaction Sites 10.1124/mol.115.099556 hsa04211 Longevity regulating pathway 111 ADCY6 ATP Pyrophosphate-Lyase 6 Adenylate cyclase type 6 Catalyzes the formation of the signaling molecule cAMP downstream of G protein-coupled receptors. Functions in signaling cascades downstream of beta-adrenergic receptors in the heart and in vascular smooth muscle cells. Functions in signaling cascades downstream of the vasopressin receptor in the kidney and has a role in renal water reabsorption. Functions in signaling cascades downstream of PTH1R and plays a role in regulating renal phosphate excretion. Functions in signaling cascades downstream of the VIP and SCT receptors in pancreas and contributes to the regulation of pancreatic amylase and fluid secretion. Signaling mediates cAMP-dependent activation of protein kinase PKA. This promotes increased phosphorylation of various proteins, including AKT. Plays a role in regulating cardiac sarcoplasmic reticulum Ca2+ uptake and storage, and is required for normal heart ventricular contractibility. altered intercellular communication Homo sapiens Increased enzyme activity and beta-adrenergic mediated vasodilation in subjects expressing a single-nucleotide variant of human adenylyl cyclase 6 10.1161/ATVBAHA.107.145557 hsa04211 Longevity regulating pathway 112 ADCY7 ATP Pyrophosphate-Lyase 7 Adenylate cyclase type 7 Catalyzes the formation of cAMP in response to activation of G protein-coupled receptors. Functions in signaling cascades activated namely by thrombin and sphingosine 1-phosphate and mediates regulation of cAMP synthesis through synergistic action of the stimulatory G alpha protein with GNA13. Also, during inflammation, mediates zymosan-induced increase intracellular cAMP, leading to protein kinase A pathway activation in order to modulate innate immune responses through heterotrimeric G proteins G(12/13). Functions in signaling cascades activated namely by dopamine and C5 alpha chain and mediates regulation of cAMP synthesis through synergistic action of the stimulatory G protein with G beta:gamma complex. altered intercellular communication Homo sapiens Regulation of cAMP responses by the G12/13 pathway converges on adenylyl cyclase VII 10.1074/jbc.M803281200 hsa04211 Longevity regulating pathway 113 ADCY8 ATP Pyrophosphate-Lyase 8 Adenylate cyclase type 8 Catalyzes the formation of cAMP in response to calcium entry leadings to cAMP signaling activation that affect processes suche as synaptic plasticity and insulin secretion. Plays a role in many brain functions, such as learning, memory, drug addiction, and anxiety modulation through regulation of synaptic plasticity by modulating long-term memory and long-term potentiation (LTP) through CREB transcription factor activity modulation. Plays a central role in insulin secretion by controlling glucose homeostasis through glucagon-like peptide 1 and glucose signaling pathway and maintains insulin secretion through calcium-dependent PKA activation leading to vesicle pool replenishment. Also, allows PTGER3 to induce potentiation of PTGER4-mediated PLA2 secretion by switching from a negative to a positive regulation, during the IL1B induced-dedifferentiation of smooth muscle cells. altered intercellular communication Homo sapiens Molecular cloning of the human type VIII adenylyl cyclase 10.1016/0014-5793(94)00836-1 hsa04211 Longevity regulating pathway 114 ADCY9 ATP Pyrophosphate-Lyase 9 Adenylate cyclase type 9 Adenylyl cyclase that catalyzes the formation of the signaling molecule cAMP in response to activation of G protein-coupled receptors. Contributes to signaling cascades activated by CRH (corticotropin-releasing factor), corticosteroids and beta-adrenergic receptors. altered intercellular communication Homo sapiens Cloning, chromosomal mapping, and regulatory properties of the human type 9 adenylyl cyclase (ADCY9) 10.1006/geno.1998.5293 hsa04211 Longevity regulating pathway 115 ADH1B ADH2; HEL-S-117 alcohol dehydrogenase 1B (class I), beta polypeptide Catalyzes the NAD-dependent oxidation of all-trans-retinol and its derivatives such as all-trans-4-hydroxyretinol and may participate in retinoid metabolism. In vitro can also catalyzes the NADH-dependent reduction of all-trans-retinal and its derivatives such as all-trans-4-oxoretinal. genomic instability Homo sapiens Shortened telomeres in individuals with abuse in alcohol consumption 10.1002/ijc.25999 unknown Unknown 125 ADH5 ADH-3; FALDH alcohol dehydrogenase 5 (class III), chi polypeptide Catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione. Also oxidizes long chain omega-hydroxy fatty acids, such as 20-HETE, producing both the intermediate aldehyde, 20-oxoarachidonate and the end product, a dicarboxylic acid, (5Z,8Z,11Z,14Z)-eicosatetraenedioate. others Homo sapiens Denitrosylate and live longer: how ADH5/GSNOR links mitophagy to aging 10.1080/15548627.2018.1475818 unknown Unknown 128 ADIPOQ ACRP30 Adiponectin receptor protein 1 Receptor for ADIPOQ, an essential hormone secreted by adipocytes that regulates glucose and lipid metabolism. Required for normal glucose and fat homeostasis and for maintaining a normal body weight. ADIPOQ-binding activates a signaling cascade that leads to increased AMPK activity, and ultimately to increased fatty acid oxidation, increased glucose uptake and decreased gluconeogenesis. deregulated nutrient sensing Homo sapiens Cloning of adiponectin receptors that mediate antidiabetic metabolic effects 10.1038/nature01705 hsa04211 Longevity regulating pathway 9370 ADIPOR1 TESBP1A Adiponectin receptor protein 1 Receptor for ADIPOQ, an essential hormone secreted by adipocytes that regulates glucose and lipid metabolism. Required for normal glucose and fat homeostasis and for maintaining a normal body weight. ADIPOQ-binding activates a signaling cascade that leads to increased AMPK activity, and ultimately to increased fatty acid oxidation, increased glucose uptake and decreased gluconeogenesis. deregulated nutrient sensing Homo sapiens Cloning of adiponectin receptors that mediate antidiabetic metabolic effects 10.1038/nature01705 hsa04211 Longevity regulating pathway 51094 ADIPOR2 Progestin And AdipoQ Receptor Family Member 2 Adiponectin receptor protein 2 Receptor for ADIPOQ, an essential hormone secreted by adipocytes that regulates glucose and lipid metabolism. Required for normal body fat and glucose homeostasis. ADIPOQ-binding activates a signaling cascade that leads to increased PPARA activity, and ultimately to increased fatty acid oxidation and glucose uptake. Has intermediate affinity for globular and full-length adiponectin. Required for normal revascularization after chronic ischemia caused by severing of blood vessels. deregulated nutrient sensing Homo sapiens Cloning of adiponectin receptors that mediate antidiabetic metabolic effects 10.1038/nature01705 hsa04211 Longevity regulating pathway 79602 AGPAT2 LPAAT-beta; BSCL 1-acylglycerol-3-phosphate O-acyltransferase 2 This gene encodes a member of the 1-acylglycerol-3-phosphate O-acyltransferase family. The protein is located within the endoplasmic reticulum membrane and converts lysophosphatidic acid to phosphatidic acid, the second step in de novo phospholipid biosynthesis. Mutations in this gene have been associated with congenital generalized lipodystrophy (CGL), or Berardinelli-Seip syndrome, a disease characterized by a near absence of adipose tissue and severe insulin resistance. Alternate transcriptional splice variants, encoding different isoforms, have been characterized. deregulated nutrient sensing Homo sapiens Human lipodystrophies: genetic and acquired diseases of adipose tissue 10.1159/000316893 unknown Unknown 10555 AGTR1 Type-1 Angiotensin II Receptor angiotensin II receptor, type 1 Receptor for angiotensin II. Mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system. altered intercellular communication Homo sapiens Cloning, expression, and characterization of a gene encoding the human angiotensin II type 1A receptor 10.1016/s0006-291x(05)80804-6 unknown Unknown 185 AIFM1 AIF; CMTX4; PDCD8 apoptosis-inducing factor, mitochondrion-associated, 1 AIFM1 is an important player in apoptosis. Like cytochrome c, AIF is localized to mitochondria and released in response to death stimuli. mitochondrial dysfunction Homo sapiens Mediation of poly(ADP-ribose) polymerase-1-dependent cell death by apoptosis-inducing factor 10.1126/science.1072221 hsa04210 Apoptosis 9131 AKT1 PKB; RAC v-akt murine thymoma viral oncogene homolog 1 AKT1 is one of 3 closely related serine/threonine-protein kinases (AKT1, AKT2 and AKT3) called the AKT kinase, and which regulate many processes including metabolism, proliferation, cell survival, growth and angiogenesis. cellular senescence Homo sapiens Akt negatively regulates the in vitro lifespan of human endothelial cells via a p53/p21-dependent pathway 10.1038/sj.emboj.7600045 hsa04211 Longevity regulating pathway 207 AKT1S1 Proline-Rich AKT1 Substrate 1 AKT1 substrate 1 Subunit of mTORC1, which regulates cell growth and survival in response to nutrient and hormonal signals. Activated mTORC1 up-regulates protein synthesis by phosphorylating key regulators of mRNA translation and ribosome synthesis. mTORC1 phosphorylates EIF4EBP1 and releases it from inhibiting the elongation initiation factor 4E (eiF4E). mTORC1 phosphorylates and activates S6K1 at 'Thr-389', which then promotes protein synthesis by phosphorylating PDCD4 and targeting it for degradation. May also play a role in nerve growth factor-mediated neuroprotection. deregulated nutrient sensing Homo sapiens Expression of proline-rich Akt-substrate PRAS40 in cell survival pathway and carcinogenesis 10.1111/j.1745-7254.2005.00184.x hsa04211 Longevity regulating pathway 84335 AKT2 V-Akt Murine Thymoma Viral Oncogene Homolog 2 RAC-beta serine/threonine-protein kinase AKT2 is one of 3 closely related serine/threonine-protein kinases (AKT1, AKT2 and AKT3) called the AKT kinase, and which regulate many processes including metabolism, proliferation, cell survival, growth and angiogenesis. AKT mediates insulin-stimulated protein synthesis by phosphorylating TSC2 at 'Ser-939' and 'Thr-1462', thereby activating mTORC1 signaling and leading to both phosphorylation of 4E-BP1 and in activation of RPS6KB1. AKT is involved in the phosphorylation of members of the FOXO factors (Forkhead family of transcription factors), leading to binding of 14-3-3 proteins and cytoplasmic localization. AKT phosphorylates 'Ser-454' on ATP citrate lyase (ACLY), thereby potentially regulating ACLY activity and fatty acid synthesis. AKT plays a role as key modulator of the AKT-mTOR signaling pathway controlling the tempo of the process of newborn neurons integration during adult neurogenesis, including correct neuron positioning, dendritic development and synapse formation. deregulated nutrient sensing Homo sapiens Molecular cloning of a second form of rac protein kinase 10.1091/mbc.2.12.1001 hsa04211 Longevity regulating pathway 208 AKT3 RAC-PK-Gamma RAC-gamma serine/threonine-protein kinase AKT3 is one of 3 closely related serine/threonine-protein kinases (AKT1, AKT2 and AKT3) called the AKT kinase, and which regulate many processes including metabolism, proliferation, cell survival, growth and angiogenesis. This is mediated through serine and/or threonine phosphorylation of a range of downstream substrates. AKT3 is the least studied AKT isoform. It plays an important role in brain development and is crucial for the viability of malignant glioma cells. AKT3 isoform may also be the key molecule in up-regulation and down-regulation of MMP13 via IL13. Required for the coordination of mitochondrial biogenesis with growth factor-induced increases in cellular energy demands. Down-regulation by RNA interference reduces the expression of the phosphorylated form of BAD, resulting in the induction of caspase-dependent apoptosis. mitochondrial dysfunction Homo sapiens VEGF stimulation of mitochondrial biogenesis: requirement of AKT3 kinase 10.1096/fj.08-106468 hsa04211 Longevity regulating pathway 10000 ALDH2 ALDM; ALDHI aldehyde dehydrogenase 2 family member Reaction=an aldehyde + H2O + NAD(+) = a carboxylate + 2 H(+) + NADH. others Homo sapiens Targeting Aldehyde Dehydrogenase 2: New Therapeutic Opportunities 10.1152/physrev.00017.2013 unknown Unknown 217 ALDH9A1 ALDH4; ALDH7 aldehyde dehydrogenase 9 family member A1 Converts gamma-trimethylaminobutyraldehyde into gamma-butyrobetaine with high efficiency (in vitro). Can catalyze the irreversible oxidation of a broad range of aldehydes to the corresponding acids in an NAD-dependent reaction, but with low efficiency. others Homo sapiens Impact of maternal aging on the molecular signature of human cumulus cells 10.1016/j.fertnstert.2012.08.012 unknown Unknown 223 APEX1 REF1; HAP1; APX APEX nuclease (multifunctional DNA repair enzyme) 1 APEX1 repairs oxidative DNA damage. genomic instability Homo sapiens Alternative excision repair pathways 10.1101/cshperspect.a012617 unknown Unknown 328 APOC3 Apolipoprotein C3; Apolipoprotein C-III apolipoprotein C-III Polymorphisms in the human APOC3 gene and promoter have been associated with lipoprotein profile, cardiovascular health, insulin (INS) sensitivity, and longevity. deregulated nutrient sensing Homo sapiens Lipoprotein Genotype and Conserved Pathway for Exceptional Longevity in Humans 10.1371/journal.pbio.0040113 unknown Unknown 345 APOE AD2 apolipoprotein E APOE activates a non-canonical MAP kinase cascade that enhances APP transcription and amyloid-β synthesis. Several polymorphisms in the APOE gene have been associated with Alzheimer’s disease. others Homo sapiens ApoE2, ApoE3, and ApoE4 Differentially Stimulate APP Transcription and Aβ Secretion 10.1016/j.cell.2016.12.044 hsa05010 Alzheimer disease 348 APP AD1 amyloid beta (A4) precursor protein APP is an important player in Alzheimer's disease. others Homo sapiens A Mutation in the Amyloid Precursor Protein Associated With Hereditary Alzheimer's Disease 10.1126/science.1925564 hsa05010 Alzheimer disease 351 APPL1 DIP13A DCC-interacting protein 13-alpha Multifunctional adapter protein that binds to various membrane receptors, nuclear factors and signaling proteins to regulate many processes, such as cell proliferation, immune response, endosomal trafficking and cell metabolism. Regulates signaling pathway leading to cell proliferation through interaction with RAB5A and subunits of the NuRD/MeCP1 complex. Functions as a positive regulator of innate immune response via activation of AKT1 signaling pathway by forming a complex with APPL1 and PIK3R1. Involved in trafficking of the TGFBR1 from the endosomes to the nucleus via microtubules in a TRAF6-dependent manner. Plays a role in cell metabolism by regulating adiponecting and insulin signaling pathways. Required for fibroblast migration through HGF cell signaling. altered intercellular communication Homo sapiens Identification of a chromosome 3p14.3-21.1 gene, APPL, encoding an adaptor molecule that interacts with the oncoprotein-serine/threonine kinase AKT2 10.1038/sj.onc.1203080 hsa04211 Longevity regulating pathway 26060 APTX FLJ20157; AOA; EAOH aprataxin The APTX protein is involved in DNA repair, and it interacts with DNA repair pathways as well as with ageing-related genes. genomic instability Homo sapiens Aprataxin, the Causative Protein for EAOH Is a Nuclear Protein With a Potential Role as a DNA Repair Protein 10.1002/ana.10808 unknown Unknown 54840 AR AIS; NR3C4; SMAX1 androgen receptor Androgen-AR plays key roles in the development of insulin and leptin resistance, which suggests that AR may contribute to certain age-related diseases such as type 2 diabetes and cardiovascular disease. deregulated nutrient sensing Homo sapiens Tissue control of androgen action: The ups and downs of androgen receptor expression 10.1016/j.mce.2017.08.002 hsa04010 MAPK signaling pathway 367 AREG AREGB; CRDGF amphiregulin Ligand of the EGF receptor/EGFR. Autocrine growth factor as well as a mitogen for a broad range of target cells including astrocytes, Schwann cells and fibroblasts. senescence-associated secretory phenotype Homo sapiens The gene expression program of prostate fibroblast senescence modulates neoplastic epithelial cell proliferation through paracrine mechanisms 10.1158/0008-5472.CAN-05-1716 hsa04010 MAPK signaling pathway 374 ARHGAP1 Rho-Related Small GTPase Protein Activator Rho GTPase activating protein 1 GTPase activator for the Rho, Rac and Cdc42 proteins, converting them to the putatively inactive GDP-bound state. Cdc42?seems to be the preferred substrate. others Homo sapiens Characterization of rhoGAP. A GTPase-activating protein for rho-related small GTPases PMID: 8288572 unknown Unknown 392 ARID5A MRF1 AT-Rich Interactive Domain-Containing Protein 5A Members of the ARID protein family, including ARID5A, have diverse functions but all appear to play important roles in development, tissue-specific gene expression, and regulation of cell growth. others Homo sapiens Differentially regulated gene expression in quiescence versus senescence and identification of ARID5A as a quiescence associated marker 10.1002/jcp.26227 unknown Unknown 10865 ARNTL Brain And Muscle ARNT-Like 1 aryl hydrocarbon receptor nuclear translocator-like Transcriptional activator which forms a core component of the circadian clock. The circadian clock, an internal time-keeping system, regulates various physiological processes through the generation of approximately 24 hour circadian rhythms in gene expression, which are translated into rhythms in metabolism and behavior. others Homo sapiens Intermolecular Recognition Revealed by the Complex Structure of Human CLOCK-BMAL1 Basic Helix-Loop-Helix Domains With E-box DNA 10.1038/cr.2012.170 unknown Unknown 406 ATF2 TREB7; CRE-BP1; HB16 activating transcription factor 2 TF2 is an important transcription factor involved in a variety of functions that may also be involved in oxidative stress response and cellular growth arrest and senescence. cellular senescence Homo sapiens Signal transduction in H2O2-induced senescence-like phenotype in human diploid fibroblasts 10.1016/s0891-5849(02)01044-4 hsa04211 Longevity regulating pathway 1386 ATF4 Tax-Responsive Enhancer Element-Binding Protein 67 Cyclic AMP-dependent transcription factor ATF-4 Transcription factor that binds the cAMP response element (CRE) (consensus: 5'-GTGACGT[AC][AG]-3') and acts both as a regulator of normal metabolic and redox processes, and as a master transcription factor during the integrated stress response (ISR). Binds to asymmetric CRE's as a heterodimer and to palindromic CRE's as a homodimer. Core effector of the ISR, which is required for adaptation to various stress, such as endoplasmic reticulum (ER) stress, amino acid starvation, mitochondrial stress or oxidative stress. Protects cells against metabolic consequences of ER oxidation by promoting expression of genes linked to amino acid sufficiency and resistance to oxidative stress. Regulates the induction of DDIT3/CHOP and asparagine synthetase (ASNS) in response to amino acid deprivation or endoplasmic reticulum (ER) stress. Together with DDIT3/CHOP, mediates ER-mediated cell death by promoting expression of genes involved in cellular amino acid metabolic processes, mRNA translation and the unfolded protein response (UPR) in response to ER stress. others Homo sapiens Isolation of cDNAs for DNA-binding proteins which specifically bind to a tax-responsive enhancer element in the long terminal repeat of human T-cell leukemia virus type I PMCID: PMC239921 hsa04211 Longevity regulating pathway 468 ATF6B Cyclic AMP-Dependent Transcription Factor ATF-6 Beta Cyclic AMP-dependent transcription factor ATF-6 beta Transcriptional factor that acts in the unfolded protein response (UPR) pathway by activating UPR target genes induced during ER stress. Binds DNA on the 5'-CCAC[GA]-3' half of the ER stress response element (ERSE) (5'-CCAATN9CCAC[GA]-3') when NF-Y is bound to ERSE. loss of proteostasis Homo sapiens A novel Creb family gene telomeric of HLA-DRA in the HLA complex 10.1006/geno.1995.9891 hsa04211 Longevity regulating pathway 1388 ATG101 Chromosome 12 Open Reading Frame 44 Autophagy-related protein 101 Autophagy factor required for autophagosome formation. Stabilizes ATG13, protecting it from proteasomal degradation. others Homo sapiens A novel, human Atg13 binding protein, Atg101, interacts with ULK1 and is essential for macroautophagy 10.4161/auto.5.5.8249 hsa04211 Longevity regulating pathway 60673 ATG13 KIAA0652 Autophagy-related protein 13 Autophagy factor required for autophagosome formation and mitophagy. Target of the TOR kinase signaling pathway that regulates autophagy through the control of the phosphorylation status of ATG13 and ULK1, and the regulation of the ATG13-ULK1-RB1CC1 complex. Through its regulation of ULK1 activity, plays a role in the regulation of the kinase activity of mTORC1 and cell proliferation. others Homo sapiens A novel, human Atg13 binding protein, Atg101, interacts with ULK1 and is essential for macroautophagy 10.4161/auto.5.5.8249 hsa04211 Longevity regulating pathway 9776 ATG5 Apoptosis-Specific Protein Autophagy protein 5 Involved in autophagic vesicle formation. Conjugation with ATG12, through a ubiquitin-like conjugating system involving ATG7 as an E1-like activating enzyme and ATG10 as an E2-like conjugating enzyme, is essential for its function. The ATG12-ATG5 conjugate acts as an E3-like enzyme which is required for lipidation of ATG8 family proteins and their association to the vesicle membranes. Involved in mitochondrial quality control after oxidative damage, and in subsequent cellular longevity. Plays a critical role in multiple aspects of lymphocyte development and is essential for both B and T lymphocyte survival and proliferation. Required for optimal processing and presentation of antigens for MHC II. Involved in the maintenance of axon morphology and membrane structures, as well as in normal adipocyte differentiation. Promotes primary ciliogenesis through removal of OFD1 from centriolar satellites and degradation of IFT20 via the autophagic pathway. others Homo sapiens Autophagy protein ATG5 interacts transiently with the hepatitis C virus RNA polymerase (NS5B) early during infection 10.1016/j.virol.2010.05.032 hsa04211 Longevity regulating pathway 9474 ATM AT1; ATE ATM serine/threonine kinase Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. genomic instability Homo sapiens ATM Kinase Is Required for Telomere Elongation in Mouse and Human Cells 10.1016/j.celrep.2015.10.035 hsa04115 p53 signaling pathway 472 ATP5O OSCP; ATPO ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit ATP5O is a mitochondrial protein. mitochondrial dysfunction Homo sapiens Identification of Mitochondrial Dysfunction in Hutchinson-Gilford Progeria Syndrome Through Use of Stable Isotope Labeling With Amino Acids in Cell Culture 10.1016/j.jprot.2013.08.008 unknown Unknown 539 ATR FRP1; SCKL; SCKL1 ATR serine/threonine kinase ATR is involved in DNA repair by activating checkpoint signalling during genotoxic stresses including the phosphorylation of ageing-related proteins such as?BRCA1?and?TP53. stem cell exhaustion Homo sapiens Deletion of the Developmentally Essential Gene ATR in Adult Mice Leads to Age-Related Phenotypes and Stem Cell Loss 10.1016/j.stem.2007.03.002 hsa04115 p53 signaling pathway 545 AXL ARK; JTK11 AXL receptor tyrosine kinase Receptor tyrosine kinase that transduces signals from the extracellular matrix into the cytoplasm by binding growth factor GAS6 and which is thus regulating many physiological processes including cell survival, cell proliferation, migration and differentiation. Ligand binding at the cell surface induces dimerization and autophosphorylation of AXL. senescence-associated secretory phenotype Homo sapiens miR-34a Promotes Vascular Smooth Muscle Cell Calcification by Downregulating SIRT1 (Sirtuin 1) and Axl (AXL Receptor Tyrosine Kinase) 10.1161/ATVBAHA.118.311298 unknown Unknown 558 BAK1 BAK; BAK-LIKE; BCL2L7 BCL2-antagonist/killer 1 Plays a role in the mitochondrial apoptosic process. Upon arrival of cell death signals, promotes mitochondrial outer membrane (MOM) permeabilization by oligomerizing to form pores within the MOM. This releases apoptogenic factors into the cytosol, including cytochrome c, promoting the activation of caspase 9 which in turn processes and activates the effector caspases. mitochondrial dysfunction Homo sapiens A conserved domain in Bak, distinct from BH1 and BH2, mediates cell death and protein binding functions https://doi.org/10.1002/j.1460-2075.1995.tb00246.x hsa04210 Apoptosis 578 BAX BCL2L4 BCL2-associated X protein BAX is an important player in apoptosis. others Homo sapiens Mitochondrial inner membrane permeabilisation enables mtDNA release during apoptosis 10.15252/embj.201899238 hsa04211 Longevity regulating pathway 581 BCL10 CARMEN; CIPER; CLAP BCL10 immune signaling adaptor Involved in adaptive immune response (PubMed:25365219). Promotes apoptosis, pro-caspase-9 maturation and activation of NF-kappa-B via NIK and IKK. May be an adapter protein between upstream TNFR1-TRADD-RIP complex and the downstream NIK-IKK-IKAP complex. NF-κB related gene Homo sapiens Antagonistic crosstalk between NF-κB and SIRT1 in the regulation of inflammation and metabolic disorders 10.1016/j.cellsig.2013.06.007 hsa04064 NF-kappa B signaling pathway 8915 BCL2 Bcl-2 B-cell CLL/lymphoma 2 Suppresses apoptosis in a variety of cell systems including factor-dependent lymphohematopoietic and neural cells. Regulates cell death by controlling the mitochondrial membrane permeability. others Homo sapiens Regulation of apoptosis resistance and ontogeny of age-dependent diseases 10.1016/s0531-5565(96)00156-8 hsa04115 p53 signaling pathway 596 BCL2A1 BFL1; GRS BCL2 related protein A1 Retards apoptosis induced by IL-3 deprivation. May function in the response of hemopoietic cells to external signals and in maintaining endothelial survival during infection. NF-κB related gene Homo sapiens Inhibition of mitochondrial cytochrome c release and suppression of caspases by gamma-tocotrienol prevent apoptosis and delay aging in stress-induced premature senescence of skin fibroblasts 10.1155/2012/785743 hsa04064 NF-kappa B signaling pathway 597 BCL2L1 Bcl-XL; Bcl-XS BCL2 like 1 Potent inhibitor of cell death. Inhibits activation of caspases. Appears to regulate cell death by blocking the voltage-dependent anion channel (VDAC) by binding to it and preventing the release of the caspase activator, CYC1, from the mitochondrial membrane. NF-κB related gene Homo sapiens Human exceptional longevity: transcriptome from centenarians is distinct from septuagenarians and reveals a role of Bcl-xL in successful aging 10.18632/aging.101078 hsa04064 NF-kappa B signaling pathway 598 BDNF ANON2; BULN2 brain-derived neurotrophic factor BDNF is a growth factor that promotes neuronal survival and is involved in numerous neuronal responses. cellular senescence Homo sapiens The BDNF val66met polymorphism affects activity-dependent secretion of BDNF and human memory and hippocampal function 10.1016/s0092-8674(03)00035-7 hsa04010 MAPK signaling pathway 627 BIRC2 CIAP1; API1 baculoviral IAP repeat containing 2 Multi-functional protein which regulates not only caspases and apoptosis, but also modulates inflammatory signaling and immunity, mitogenic kinase signaling, and cell proliferation, as well as cell invasion and metastasis. NF-κB related gene Homo sapiens A serum protein signature of APOE genotypes in centenarians 10.1111/acel.13023 hsa04064 NF-kappa B signaling pathway 329 BIRC3 C-IAP2; RNF49 Baculoviral IAP Repeat Containing 3 Multi-functional protein which regulates not only caspases and apoptosis, but also modulates inflammatory signaling and immunity, mitogenic kinase signaling and cell proliferation, as well as cell invasion and metastasis. NF-κB related gene Homo sapiens Differential regulation of inhibitors of apoptosis proteins in Alzheimer's disease brains 10.1016/j.nbd.2006.12.017 hsa04064 NF-kappa B signaling pathway 330 BLM RECQL3 Bloom syndrome, RecQ helicase-like ATP-dependent DNA helicase that unwinds single- and double-stranded DNA in a 3'-5' direction. genomic instability Homo sapiens Bloom's Syndrome: Why Not Premature Aging?: A Comparison of the BLM and WRN Helicases 10.1016/j.arr.2016.05.010 unknown Unknown 641 BMI1 RNF51; PCGF4 BMI1 proto-oncogene, polycomb ring finger BMI1 is an oncogene involved in transcriptional regulation by remodelling chromatin. It may also be involved in development. stem cell exhaustion Homo sapiens Bmi1 is down-regulated in the aging brain and displays antioxidant and protective activities in neurons 10.1371/journal.pone.0031870 hsa04550 Signaling pathways regulating pluripotency of stem cells 648 BMP2 BDA2; BMP2 Bone Morphogenetic Protein 2 Induces cartilage and bone formation. Stimulates the differentiation of myoblasts into osteoblasts via the EIF2AK3-EIF2A- ATF4 pathway. BMP2 activation of EIF2AK3 stimulates phosphorylation of EIF2A which leads to increased expression of ATF4 which plays a central role in osteoblast differentiation. senescence-associated secretory phenotype Homo sapiens Long noncoding RNA Bmncr regulates mesenchymal stem cell fate during skeletal aging 10.1172/JCI99044 hsa04350 TGF-beta signaling pathway 650 BMP6 VGR1; VGR Bone Morphogenetic Protein 6 Induces cartilage and bone formation. senescence-associated secretory phenotype Homo sapiens Increased BMP6 Levels in the Brains of Alzheimer's Disease Patients and APP Transgenic Mice Are Accompanied by Impaired Neurogenesis 10.1523/JNEUROSCI.1305-10.2010 hsa04350 TGF-beta signaling pathway 654 BRCA1 RNF53; BROVCA1 breast cancer 1, early onset E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. genomic instability Homo sapiens Large-scale Genomic Analyses Link Reproductive Aging to Hypothalamic Signaling, Breast Cancer Susceptibility and BRCA1-mediated DNA Repair 10.1038/ng.3412 hsa04151 PI3K-Akt signaling pathway 672 BRCA2 FAD1; BRCC2; XRCC11 breast cancer 2, early onset XRCC1 is a molecular scaffold protein that assembles multi-protein complexes involved in DNA single-strand break repair.Cells from Homo sapiens patients with mutations in BRCA2 exhibited reduced rates of DNA repair and elevated levels of protein ADP-ribosylation. genomic instability Homo sapiens XRCC1 Mutation Is Associated With PARP1 Hyperactivation and Cerebellar Ataxia 10.1038/nature20790 unknown Unknown 675 BSCL2 GNG3LG; SPG17 Berardinelli-Seip congenital lipodystrophy 2 (seipin) It is a regulator of lipid catabolism essential for adipocyte differentiation. May also be involved in the central regulation of energy homeostasis. Necessary for correct lipid storage and lipid droplets maintenance; may play a tissue-autonomous role in controlling lipid storage in adipocytes and in preventing ectopic lipid droplet formation in non-adipose tissues. deregulated nutrient sensing Homo sapiens Genetic Syndromes in Man With Potential Relevance to the Pathobiology of Aging PMID:?147113 unknown Unknown 26580 BTK AGMX1; BPK Bruton Tyrosine Kinase Non-receptor tyrosine kinase indispensable for B lymphocyte development, differentiation and signaling. Binding of antigen to the B-cell antigen receptor (BCR) triggers signaling that ultimately leads to B-cell activation. After BCR engagement and activation at the plasma membrane, phosphorylates PLCG2 at several sites, igniting the downstream signaling pathway through calcium mobilization, followed by activation of the protein kinase C (PKC) family members. NF-κB related gene Homo sapiens BTK Modulates p53 Activity to Enhance Apoptotic and Senescent Responses 10.1158/0008-5472.CAN-16-0690 hsa04064 NF-kappa B signaling pathway 695 BUB1B BUBR1; MAD3L; Bub1A BUB1 mitotic checkpoint serine/threonine kinase B BUB1B is a mitotic checkpoint that controls chromosome segregation and maintains genetic stability. Inhibit aging. genomic instability Homo sapiens Constitutional aneuploidy and cancer predisposition caused by biallelic mutations in BUB1B 10.1038/ng1449 hsa04110 Cell cycle 701 BUB3 Mitotic Checkpoint Protein BUB3 BUB3 mitotic checkpoint protein It has a dual function in spindle-assembly checkpoint signaling and in promoting the establishment of correct kinetochore-microtubule (K-MT) attachments. Promotes the formation of stable end-on bipolar attachments. Necessary for kinetochore localization of BUB1. Regulates chromosome segregation during oocyte meiosis. The BUB1/BUB3 complex plays a role in the inhibition of anaphase-promoting complex or cyclosome (APC/C) when spindle-assembly checkpoint is activated and inhibits the ubiquitin ligase activity of APC/C by phosphorylating its activator CDC20. This complex can also phosphorylate MAD1L1. others Homo sapiens The human homologue of Bub3 is required for kinetochore localization of Bub1 and a Mad3/Bub1-related protein kinase 10.1083/jcb.142.1.1 hsa04110 Cell cycle 9184 C1QA Complement C1q Chain A complement component 1, q subcomponent, A chain C1q associates with the proenzymes C1r and C1s to yield C1, the first component of the serum complement system. The collagen-like regions of C1q interact with the Ca(2+)-dependent C1r(2)C1s(2) proenzyme complex, and efficient activation of C1 takes place on interaction of the globular heads of C1q with the Fc regions of IgG or IgM antibody present in immune complexes. others Homo sapiens Homozygous single nucleotide polymorphism of the complement C1QA gene is associated with decreased levels of C1q in patients with subacute cutaneous lupus erythematosus 10.1191/0961203303lu329oa unknown Unknown 712 CACNA1A Cav2.1; EA2; APCA calcium channel, voltage-dependent, P/Q type, alpha 1A subunit CACNA1A mediates calcium ions in a variety of processes such as cell division and gene expression. others Homo sapiens Familial hemiplegic migraine and episodic ataxia type-2 are caused by mutations in the Ca2+ channel gene CACNL1A4 10.1016/s0092-8674(00)81373-2 hsa04010 MAPK signaling pathway 773 CALR Sicca Syndrome Antigen A;CRP55 Calreticulin Calcium-binding chaperone that promotes folding, oligomeric assembly and quality control in the endoplasmic reticulum (ER) via the calreticulin/calnexin cycle. This lectin interacts transiently with almost all of the monoglucosylated glycoproteins that are synthesized in the ER. Interacts with the DNA-binding domain of NR3C1 and mediates its nuclear export. Involved in maternal gene expression regulation. May participate in oocyte maturation via the regulation of calcium homeostasis (By similarity). loss of proteostasis Homo sapiens Calreticulin functions as a molecular chaperone in the biosynthesis of myeloperoxidase. 10.1074/jbc.270.9.4741 hsa04141 Protein processing in endoplasmic reticulum 811 CAMK4 CAM Kinase- GR calcium/calmodulin-dependent protein kinase type IV Calcium/calmodulin-dependent protein kinase that operates in the calcium-triggered CaMKK-CaMK4 signaling cascade and regulates, mainly by phosphorylation, the activity of several transcription activators, such as CREB1, MEF2D, JUN and RORA, which play pivotal roles in immune response, inflammation, and memory consolidation. In the thymus, regulates the CD4+/CD8+ double positive thymocytes selection threshold during T-cell ontogeny. In CD4 memory T-cells, is required to link T-cell antigen receptor (TCR) signaling to the production of IL2, IFNG and IL4 (through the regulation of CREB and MEF2). Regulates the differentiation and survival phases of osteoclasts and dendritic cells (DCs). Mediates DCs survival by linking TLR4 and the regulation of temporal expression of BCL2. others Homo sapiens Activation mechanisms for Ca2+/calmodulin-dependent protein kinase IV. Identification of a brain CaM-kinase IV kinase PMID: 7961813 hsa04211 Longevity regulating pathway 814 CAMKK2 CaM-Kinase Kinase Beta Calcium/calmodulin-dependent protein kinase kinase 2 Calcium/calmodulin-dependent protein kinase belonging to a proposed calcium-triggered signaling cascade involved in a number of cellular processes. Isoform 1, isoform 2 and isoform 3 phosphorylate CAMK1 and CAMK4. Isoform 3 phosphorylates CAMK1D. Isoform 4, isoform 5 and isoform 6 lacking part of the calmodulin-binding domain are inactive. Efficiently phosphorylates 5'-AMP-activated protein kinase (AMPK) trimer, including that consisting of PRKAA1, PRKAB1 and PRKAG1. This phosphorylation is stimulated in response to Ca2+ signals. Seems to be involved in hippocampal activation of CREB1. May play a role in neurite growth. Isoform 3 may promote neurite elongation, while isoform 1 may promoter neurite branching. others Homo sapiens Human Ca2+/calmodulin-dependent protein kinase kinase beta gene encodes multiple isoforms that display distinct kinase activity 10.1074/jbc.M011720200 hsa04211 Longevity regulating pathway 10645 CARD10 BIMP1 Caspase Recruitment Domain Family Member 10 Activates NF-kappa-B via BCL10 and IKK. NF-κB related gene Homo sapiens Whole-exome sequencing and imaging genetics identify functional variants for rate of change in hippocampal volume in mild cognitive impairment 10.1038/mp.2013.24 hsa04064 NF-kappa B signaling pathway 29775 CAT Catalase; EC 1.11.1.6; Epididymis Secretory Sperm Binding Protein catalase Cardiac-specific overexpression prolongs lifespan in mice. Catalase protects cardiomyocytes from ageing-induced contractile defects and protein damage. others Homo sapiens Role of Catalase in Oxidative Stress- and Age-Associated Degenerative Diseases 10.1155/2019/9613090 hsa04211 Longevity regulating pathway 847 CBX7 Chromobox Homolog 7 chromobox protein homolog 7 Component of a Polycomb group (PcG) multiprotein PRC1-like complex, a complex class required to maintain the transcriptionally repressive state of many genes, including Hox genes, throughout development. PcG PRC1 complex acts via chromatin remodeling and modification of histones; it mediates monoubiquitination of histone H2A 'Lys-119', rendering chromatin heritably changed in its expressibility. Promotes histone H3 trimethylation at 'Lys-9' (H3K9me3). Binds to trimethylated lysine residues in histones, and possibly also other proteins. Regulator of cellular lifespan by maintaining the repression of CDKN2A, but not by inducing telomerase activity. genomic instability Homo sapiens Several distinct polycomb complexes regulate and co-localize on the INK4a tumor suppressor locus 10.1371/journal.pone.0006380 unknown Unknown 23492 CCL1 SISe; TCA3 C-C Motif Chemokine Ligand 1 Cytokine that is chemotactic for monocytes but not for neutrophils. Binds to CCR8. senescence-associated secretory phenotype Homo sapiens Normal ageing is associated with an increase in Th2 cells, MCP-1 (CCL1) and RANTES (CCL5), with differences in sCD40L and PDGF-AA between sexes 10.1111/j.1365-2249.2012.04644.x unknown Unknown 6346 CCL13 SCYL1; NCC1 C-C Motif Chemokine Ligand 13 Chemotactic factor that attracts monocytes, lymphocytes, basophils and eosinophils, but not neutrophils. Signals through CCR2B and CCR3 receptors. Plays a role in the accumulation of leukocytes at both sides of allergic and non-allergic inflammation. senescence-associated secretory phenotype Homo sapiens Increased cardiovascular and atherosclerosis markers in blood of older patients with atopic dermatitis 10.1016/j.anai.2019.10.013 hsa04064 NF-kappa B signaling pathway 6357 CCL19 SCYA19; CKb11 C-C Motif Chemokine Ligand 19 May play a role not only in inflammatory and immunological responses but also in normal lymphocyte recirculation and homing. May play an important role in trafficking of T-cells in thymus, and T-cell and B-cell migration to secondary lymphoid organs. Binds to chemokine receptor CCR7. Recombinant CCL19 shows potent chemotactic activity for T-cells and B-cells but not for granulocytes and monocytes. Binds to atypical chemokine receptor ACKR4 and mediates the recruitment of beta-arrestin (ARRB1/2) to ACKR4. NF-κB related gene Homo sapiens Mechanisms of aging in senescence-accelerated mice 10.1186/gb-2005-6-6-r48 hsa04064 NF-kappa B signaling pathway 6363 CCL20 MIP3A; CKb4 C-C Motif Chemokine Ligand 20 Acts as a ligand for C-C chemokine receptor CCR6. Signals through binding and activation of CCR6 and induces a strong chemotactic response and mobilization of intracellular calcium ions. senescence-associated secretory phenotype Homo sapiens SIRT1/FoxO3 axis alteration leads to aberrant immune responses in bronchial epithelial cells 10.1111/jcmm.13509 unknown Unknown 6364 CCL21 CKb9; TCA4 C-C Motif Chemokine Ligand 21 Inhibits hemopoiesis and stimulates chemotaxis. Chemotactic in vitro for thymocytes and activated T-cells, but not for B-cells, macrophages, or neutrophils. Shows preferential activity towards naive T-cells. NF-κB related gene Homo sapiens Distinctive immunoregulatory effects of adenosine on T cells of older humans 10.1096/fj.11-197046 hsa04064 NF-kappa B signaling pathway 6366 CCL26 SCYA26; IMAC C-C Motif Chemokine Ligand 26 Chemoattractant for eosinophils and basophils. senescence-associated secretory phenotype Homo sapiens Age-specific changes in the molecular phenotype of patients with moderate-to-severe atopic dermatitis 10.1016/j.jaci.2019.01.015 unknown Unknown 10344 CCL3 MIP1A; SCYA3 C-C Motif Chemokine Ligand 3 Monokine with inflammatory and chemokinetic properties. Binds to CCR1, CCR4 and CCR5. One of the major HIV-suppressive factors produced by CD8+ T-cells. senescence-associated secretory phenotype Homo sapiens Age-related pro-inflammatory and pro-angiogenic changes in human aqueous humor 10.18240/ijo.2018.02.03 unknown Unknown 6348 CCL4 MIP1B; SCYA4 C-C Motif Chemokine Ligand 4 Monokine with inflammatory and chemokinetic properties. Binds to CCR5. One of the major HIV-suppressive factors produced by CD8+ T-cells. Recombinant MIP-1-beta induces a dose-dependent inhibition of different strains of HIV-1, HIV-2, and simian immunodeficiency virus (SIV). The processed form MIP-1-beta(3-69) retains the abilities to induce down-modulation of surface expression of the chemokine receptor CCR5 and to inhibit the CCR5-mediated entry of HIV-1 in T-cells. NF-κB related gene Homo sapiens MicroRNA-125b modulates inflammatory chemokine CCL4 expression in immune cells and its reduction causes CCL4 increase with age 10.1111/acel.12294 hsa04064 NF-kappa B signaling pathway 6351 CCL7 SCYA6; SCYA7 C-C Motif Chemokine Ligand 7 Chemotactic factor that attracts monocytes and eosinophils, but not neutrophils. Augments monocyte anti-tumor activity. senescence-associated secretory phenotype Homo sapiens Increased cardiovascular and atherosclerosis markers in blood of older patients with atopic dermatitis 10.1016/j.anai.2019.10.013 unknown Unknown 6354 CCNA2 CCNA; CCN1 cyclin A2 Involved in cell cycle control, binds and activates CDK2 and promotes transition through G1/S and G2/M. stem cell exhaustion Homo sapiens Structure and cell cycle-regulated transcription of the human cyclin A gene 10.1073/pnas.91.12.5490 hsa04218 Cellular senescence 890 CD14 CD14 Antigen CD14 Molecule Coreceptor for bacterial lipopolysaccharide (PubMed:1698311, PubMed:23264655). In concert with LBP, binds to monomeric lipopolysaccharide and delivers it to the LY96/TLR4 complex, thereby mediating the innate immune response to bacterial lipopolysaccharide (LPS). NF-κB related gene Homo sapiens Association of CD14 with incident dementia and markers of brain aging and injury 10.1212/WNL.0000000000008682 hsa04064 NF-kappa B signaling pathway 929 CD40LG CD154; Gp39 CD40 Ligand Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. NF-κB related gene Homo sapiens Elderly dendritic cells respond to LPS/IFN-γ and CD40L stimulation despite incomplete maturation 10.1371/journal.pone.0195313 hsa04064 NF-kappa B signaling pathway 959 CD55 DAF; TC CD55 Molecule (Cromer Blood Group) This protein recognizes C4b and C3b fragments that condense with cell-surface hydroxyl or amino groups when nascent C4b and C3b are locally generated during C4 and c3 activation. senescence-associated secretory phenotype Homo sapiens Early and extensive CD55 loss from red blood cells supports a causal role in malarial anaemia 10.1186/1475-2875-10-386 unknown Unknown 1604 CD9 MIC3; P24 CD9 Molecule Integral membrane protein associated with integrins, which regulates different processes, such as sperm-egg fusion, platelet activation and aggregation, and cell adhesion. senescence-associated secretory phenotype Homo sapiens CD9 expression in vascular aging and atherosclerosis 10.14670/HH-18-268 unknown Unknown 928 CDC42 Cell Division Control Protein 42 Homolog cell division cycle 42 Probably involved in the organization of the actin cytoskeleton by acting downstream of CDC42, inducing actin filament assembly. Alters CDC42-induced cell shape changes. In activated T-cells, may play a role in CDC42-mediated F-actin accumulation at the immunological synapse. May play a role in early contractile events in phagocytosis in macrophages. others Homo sapiens Cdc42: An Essential Rho-Type GTPase Controlling Eukaryotic Cell Polarity 10.1128/MMBR.63.1.54-105.1999 hsa04010 MAPK signaling pathway 998 CDK1 CDC28A; CDC2 cyclin-dependent kinase 1 An important regulator of the cell cycle, CDK1 also appears to be involved in apoptosis. cellular senescence Homo sapiens TIAR marks nuclear G2/M transition granules and restricts CDK1 activity under replication stress 10.15252/embr.201846224 hsa04115 p53 signaling pathway 983 CDK7 CDK-Activating Kinase 1 cyclin-dependent kinase 7 Serine/threonine kinase involved in cell cycle control and in RNA polymerase II-mediated RNA transcription. Cyclin-dependent kinases (CDKs) are activated by the binding to a cyclin and mediate the progression through the cell cycle. Each different complex controls a specific transition between 2 subsequent phases in the cell cycle. Required for both activation and complex formation of CDK1/cyclin-B during G2-M transition, and for activation of CDK2/cyclins during G1-S transition (but not complex formation). Its expression and activity are constant throughout the cell cycle. Upon DNA damage, triggers p53/TP53 activation by phosphorylation, but is inactivated in turn by p53/TP53; this feedback loop may lead to an arrest of the cell cycle and of the transcription, helping in cell recovery, or to apoptosis. Required for DNA-bound peptides-mediated transcription and cellular growth inhibition. others Homo sapiens novel cyclin associates with MO15/CDK7 to form the CDK-activating kinase 10.1016/0092-8674(94)90535-5 hsa04110 Cell cycle 1022 CDKN1A CAP20 cyclin-dependent kinase inhibitor 1A (p21, Cip1) May be involved in p53/TP53 mediated inhibition of cellular proliferation in response to DNA damage. Binds to and inhibits cyclin-dependent kinase activity, preventing phosphorylation of critical cyclin-dependent kinase substrates and blocking cell cycle progression. Functions in the nuclear localization and assembly of cyclin D-CDK4 complex and promotes its kinase activity towards RB1. At higher stoichiometric ratios, inhibits the kinase activity of the cyclin D-CDK4 complex. Inhibits DNA synthesis by DNA polymerase delta by competing with POLD3 for PCNA binding. Plays an important role in controlling cell cycle progression and DNA damage-induced G2 arrest. genomic instability Homo sapiens The p21 Cdk-interacting protein Cip1 is a potent inhibitor of G1 cyclin-dependent kinases 10.1016/0092-8674(93)90499-g hsa04115 p53 signaling pathway 1026 CDKN2A CDK4I; p16; INK4a cyclin-dependent kinase inhibitor 2A The CDKN2A gene encodes different transcripts involved mostly in cell cycle regulation and cellular senescence, including the tumour suppressor proteins p16 and p19. cellular senescence Homo sapiens Involvement of the INK4a/Arf Gene Locus in Senescence 10.1046/j.1474-9728.2003.00048.x hsa04115 p53 signaling pathway 1029 CDKN2B P14-INK4b cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) Interacts strongly with CDK4 and CDK6. Potent inhibitor. Potential effector of TGF-beta induced cell cycle arrest. others Homo sapiens MTAP and CDKN2B genes are associated with myocardial infarction in Chinese Hans 10.1016/j.clinbiochem.2009.02.021 hsa04218 Cellular senescence 1030 CEBPA C/EBP-alpha; CEBP CCAAT/enhancer binding protein (C/EBP), alpha CEBPA is a transcription factor expressed in adipose tissues that modulates the expression of leptin (LEP). CEBPA-null die shortly after birth. others Homo sapiens Aging and liver regeneration 10.1016/j.tem.2009.01.005 unknown Unknown 1050 CEBPB LAP; CRP2; NFIL6 CCAAT/enhancer binding protein (C/EBP), beta Like CEBPA, CEBPB is a transcription factor involved in fat metabolism. CEBPB also appears to play a role in liver regeneration. others Homo sapiens Epigenome-wide association studies identify DNA methylation associated with kidney function 10.1038/s41467-017-01297-7 hsa04657 IL-17 signaling pathway 1051 CETP BPI Fold Containing Family F cholesteryl ester transfer protein, plasma Involved in the transfer of neutral lipids, including cholesteryl ester and triglyceride, among lipoprotein particles. Allows the net movement of cholesteryl ester from high density lipoproteins/HDL to triglyceride-rich very low density lipoproteins/VLDL, and the equimolar transport of triglyceride from VLDL to HDL. Regulates the reverse cholesterol transport, by which excess cholesterol is removed from peripheral tissues and returned to the liver for elimination. deregulated nutrient sensing Homo sapiens Cloning and Sequencing of Human Cholesteryl Ester Transfer Protein Cdna 10.1038/327632a0 unknown Unknown 1071 CFLAR FLAME; CFLIP CASP8 And FADD Like Apoptosis Regulator Apoptosis regulator protein which may function as a crucial link between cell survival and cell death pathways in mammalian cells. Acts as an inhibitor of TNFRSF6 mediated apoptosis. NF-κB related gene Homo sapiens The apoptotic transcriptome of the human MII oocyte: characterization and age-related changes 10.1007/s10495-012-0783-5 hsa04064 NF-kappa B signaling pathway 8837 CHCHD2 C7orf17; MIX17B; MNRR1 coiled-coil-helix-coiled-coil-helix domain containing 2 Mutations in the CHCHD2 gene have been linked to autosomal dominant forms of Parkinson's disease (PD). others Homo sapiens CHCHD2 mutational screening in Brazilian patients with familial Parkinson's disease 10.1016/j.neurobiolaging.2018.09.026 unknown Unknown 51142 CHEK2 Serine/Threonine-Protein Kinase Chk2 checkpoint kinase 2 Serine/threonine-protein kinase which is required for checkpoint-mediated cell cycle arrest, activation of DNA repair and apoptosis in response to the presence of DNA double-strand breaks. May also negatively regulate cell cycle progression during unperturbed cell cycles. May also phosphorylate NEK6 which is involved in G2/M cell cycle arrest. Regulates DNA repair through phosphorylation of BRCA2, enhancing the association of RAD51 with chromatin which promotes DNA repair by homologous recombination. Also stimulates the transcription of genes involved in DNA repair (including BRCA2) through the phosphorylation and activation of the transcription factor FOXM1. Regulates apoptosis through the phosphorylation of p53/TP53, MDM4 and PML. Also controls the transcription of pro-apoptotic genes through phosphorylation of the transcription factor E2F1. genomic instability Homo sapiens Chk2 and REGγ-dependent DBC1 Regulation in DNA Damage Induced Apoptosis 10.1093/nar/gku1065 hsa04115 p53 signaling pathway 11200 CISD2 CDGSH Iron Sulfur Domain 2 CDGSH iron sulfur domain 2 Regulator of autophagy that contributes to antagonize BECN1-mediated cellular autophagy at the endoplasmic reticulum. Participates in the interaction of BCL2 with BECN1 and is required for BCL2-mediated depression of endoplasmic reticulum Ca2+?stores during autophagy. Contributes to BIK-initiated autophagy, while it is not involved in BIK-dependent activation of caspases. Involved in life span control, probably via its function as regulator of autophagy. others Homo sapiens A homozygous mutation in a novel zinc-finger protein, ERIS, is responsible for Wolfram syndrome 2 10.1086/520961 unknown Unknown 493856 CLOCK Circadian Locomoter Output Cycles Protein Kaput clock circadian regulator Transcriptional activator which forms a core component of the circadian clock. The circadian clock, an internal time-keeping system, regulates various physiological processes through the generation of approximately 25 hour circadian rhythms in gene expression, which are translated into rhythms in metabolism and behavior. others Homo sapiens Intermolecular Recognition Revealed by the Complex Structure of Human CLOCK-BMAL2 Basic Helix-Loop-Helix Domains With E-box DNA 10.1038/cr.2012.171 unknown Unknown 9575 CLU SGP-2; SP-40; TRPM-2 clusterin It may be involved in apoptosis. cellular senescence Homo sapiens Serum Levels of the Senescence Biomarker clusterin/apolipoprotein J Increase Significantly in Diabetes Type II and During Development of Coronary Heart Disease or at Myocardial Infarction 10.1016/s0531-5565(02)00139-0 unknown Unknown 1191 CNR1 CANN6 cannabinoid receptor 1 (brain) G-protein coupled receptor for endogenous cannabinoids (eCBs), including N-arachidonoylethanolamide (also called anandamide or AEA) and 2-arachidonoylglycerol (2-AG), as well as phytocannabinoids, such as delta9-tetrahydrocannabinol (THC). Mediates many cannabinoid-induced effects, acting, among others, on food intake, memory loss, gastrointestinal motility, catalepsy, ambulatory activity, anxiety, chronic pain. Signaling typically involves reduction in cyclic AMP. In the hypothalamus, may have a dual effect on mitochondrial respiration depending upon the agonist dose and possibly upon the cell type. May also affect de novo cholesterol synthesis and HDL-cholesteryl ether uptake. Peripherally modulates energy metabolism. deregulated nutrient sensing Homo sapiens CB1 cannabinoid receptor activity is modulated by the cannabinoid receptor interacting protein CRIP 1a 10.1124/mol.107.039263 unknown Unknown 1268 COQ7 CLK-1; CAT5 coenzyme Q7 homolog, ubiquinone (yeast) 2-fold reduction of MCLK1 expression in mice affects mitochondrial function substantially, and also exhibit surprisingly high levels of oxidative damage and early mitochondrial dysfunction. mitochondrial dysfunction Homo sapiens Conservation of the Caenorhabditis elegans timing gene clk-1 from yeast to human: a gene required for ubiquinone biosynthesis with potential implications for aging 10.1007/s003359901147 unknown Unknown 10229 CREB1 Cyclic Adenosine 3',5'-Monophosphate Response Element Binding Protein cAMP responsive element binding protein 1 This gene encodes a transcription factor that is a member of the leucine zipper family of DNA binding proteins. This protein binds as a homodimer to the cAMP-responsive element, an octameric palindrome. genomic instability Homo sapiens Direct regulation of CREB transcriptional activity by ATM in response to genotoxic stress 10.1073/pnas.0307718101 hsa04211 Longevity regulating pathway 1385 CREB3 Transcription Factor LZIP-Alpha cyclic AMP-responsive element-binding protein 3 Endoplasmic reticulum (ER)-bound sequence-specific transcription factor that directly binds DNA and activates transcription. Plays a role in the unfolded protein response (UPR), promoting cell survival versus ER stress-induced apoptotic cell death. Also involved in cell proliferation, migration and differentiation, tumor suppression and inflammatory gene expression. Acts as a positive regulator of LKN-1/CCL15-induced chemotaxis signaling of leukocyte cell migration. Associates with chromatin to the HERPUD1 promoter. Also induces transcriptional activation of chemokine receptors. loss of proteostasis Homo sapiens Luman is capable of binding and activating transcription from the unfolded protein response element 10.1016/j.bbrc.2005.03.141 hsa04211 Longevity regulating pathway 10488 CREB3L1 OASIS cyclic AMP-responsive element-binding protein 3-like protein 1 Transcription factor involved in unfolded protein response (UPR). Binds the DNA consensus sequence 5'-GTGXGCXGC-3'. In the absence of endoplasmic reticulum (ER) stress, inserted into ER membranes, with N-terminal DNA-binding and transcription activation domains oriented toward the cytosolic face of the membrane. In response to ER stress, transported to the Golgi, where it is cleaved in a site-specific manner by resident proteases S1P/MBTPS1 and S2P/MBTPS2. The released N-terminal cytosolic domain is translocated to the nucleus to effect transcription of specific target genes. Plays a critical role in bone formation through the transcription of COL1A1, and possibly COL1A2, and the secretion of bone matrix proteins. Directly binds to the UPR element (UPRE)-like sequence in an osteoblast-specific COL1A1 promoter region and induces its transcription. Does not regulate COL1A1 in other tissues, such as skin. loss of proteostasis Homo sapiens OASIS is a transcriptional activator of CREB/ATF family with a transmembrane domain 10.1016/S0006-291X(02)00253-X hsa04211 Longevity regulating pathway 90993 CREB3L2 B-ZIB Transcription Factor cyclic AMP-responsive element-binding protein 3-like protein 2 Transcription factor involved in unfolded protein response (UPR). In the absence of endoplasmic reticulum (ER) stress, inserted into ER membranes, with N-terminal DNA-binding and transcription activation domains oriented toward the cytosolic face of the membrane. In response to ER stress, transported to the Golgi, where it is cleaved in a site-specific manner by resident proteases S1P/MBTPS1 and S2P/MBTPS2. The released N-terminal cytosolic domain is translocated to the nucleus to effect transcription of specific target genes. Plays a critical role in chondrogenesis by activating the transcription of SEC23A, which promotes the transport and secretion of cartilage matrix proteins, and possibly that of ER biogenesis-related genes. In a neuroblastoma cell line, protects cells from ER stress-induced death. In vitro activates transcription of target genes via direct binding to the CRE site. loss of proteostasis Homo sapiens BBF2H7, a novel transmembrane bZIP transcription factor, is a new type of endoplasmic reticulum stress transducer 10.1128/MCB.01552-06 hsa04211 Longevity regulating pathway 64764 CREB3L3 Transcription Factor CREB-H cyclic AMP-responsive element-binding protein 3-like protein 3 Transcription factor that may act during endoplasmic reticulum stress by activating unfolded protein response target genes. Activated in response to cAMP stimulation. In vitro, binds to the cAMP response element (CRE) and box-B element. Activates transcription through box-B element. Activates transcription through CRE. Seems to function synergistically with ATF6. In acute inflammatory response, may activate expression of acute phase response (APR) genes. May be involved in growth suppression. loss of proteostasis Homo sapiens CREB-H: a novel mammalian transcription factor belonging to the CREB/ATF family and functioning via the box-B element with a liver-specific expression 10.1093/nar/29.10.2154 hsa04211 Longevity regulating pathway 84699 CREB3L4 Cyclic AMP-Responsive Element-Binding Protein 4 cyclic AMP-responsive element-binding protein 3-like protein 4 Transcriptional activator that may play a role in the unfolded protein response. Binds to the UPR element (UPRE) but not to CRE element. Preferentially binds DNA with to the consensus sequence 5'-T[GT]ACGT[GA][GT]-3' and has transcriptional activation activity from UPRE. Binds to NF-kappa-B site and has transcriptional activation activity from NF-kappa-B-containing regulatory elements. loss of proteostasis Homo sapiens CREB4, a transmembrane bZip transcription factor and potential new substrate for regulation and cleavage by S1P 10.1091/mbc.e05-06-0500 hsa04211 Longevity regulating pathway 148327 CREB5 CREBPA cyclic AMP-responsive element-binding protein 5 Binds to the cAMP response element and activates transcription. others Homo sapiens Regulation of trans-activating capacity of CRE-BPa by phorbol ester tumor promoter TPA PMID: 8378084 hsa04211 Longevity regulating pathway 9586 CREBBP Histone Lysine Acetyltransferase CREBBP CREB binding protein Acetylates histones, giving a specific tag for transcriptional activation. Also acetylates non-histone proteins, like DDX21, FBL, IRF2, MAFG, NCOA3, POLR1E/PAF53 and FOXO1. Binds specifically to phosphorylated CREB and enhances its transcriptional activity toward cAMP-responsive genes. Acts as a coactivator of ALX1. Acts as a circadian transcriptional coactivator which enhances the activity of the circadian transcriptional activators: NPAS2-ARNTL/BMAL1 and CLOCK-ARNTL/BMAL1 heterodimers. others Homo sapiens Pokemon (FBI-1) interacts with Smad4 to repress TGF-β-induced transcriptional responses 10.1016/j.bbagrm.2014.12.008 hsa04066 HIF-1 signaling pathway 1387 CSF2RB CD131; IL3RB Colony Stimulating Factor 2 Receptor Subunit Beta High affinity receptor for interleukin-3, interleukin-5 and granulocyte-macrophage colony-stimulating factor. senescence-associated secretory phenotype Homo sapiens Senescence-associated-gene signature identifies genes linked to age, prognosis, and progression of human gliomas 10.1016/j.jgo.2014.08.003 unknown Unknown 1439 CSNK1E Casein Kinase I Isoform Epsilon casein kinase 1, epsilon Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Can phosphorylate a large number of proteins. Participates in Wnt signaling. Phosphorylates DVL1 and DVL2. Central component of the circadian clock. In balance with PP1, determines the circadian period length, through the regulation of the speed and rhythmicity of PER1 and PER2 phosphorylation. Controls PER1 and PER2 nuclear transport and degradation. Inhibits cytokine-induced granuloytic differentiation. loss of proteostasis Homo sapiens Testing the circadian gene hypothesis in prostate cancer: a population-based case-control study 10.1158/0008-5472.CAN-09-0648 hsa04310 Wnt signaling pathway 1454 CTF1 Cardiotrophin-1 cardiotrophin 1 Induce cardiac myocyte hypertrophy in vitro. Binds to and activates the ILST/gp130 receptor. others Homo sapiens Human cardiotrophin-1: protein and gene structure, biological and binding activities, and chromosomal localization 10.1006/cyto.1996.0026 hsa04630 JAK-STAT signaling pathway 1489 CTGF IGFBP8; CCN2 connective tissue growth factor The encoded protein plays a role in chondrocyte proliferation and differentiation, cell adhesion in many cell types, and is related to platelet-derived growth factor. stem cell exhaustion Homo sapiens Expression of Connective Tissue Growth Factor, a Biomarker in Senescence of Human Diploid Fibroblasts, Is Up-Regulated by a Transforming Growth Factor-Beta-Mediated Signaling Pathway 10.1016/j.bbrc.2004.04.108 unknown Unknown 1490 CTNNB1 beta-catenin; armadillo; CTNNB catenin (cadherin-associated protein), beta 1, 88kDa CTNNB1, also known as beta-catenin, is a member of the adherens junctions proteins, involved in epithelial layers that mediate adhesion between cells, cell communication, growth, embryogenesis, and wound healing. altered intercellular communication Homo sapiens beta-Catenin Controls Hair Follicle Morphogenesis and Stem Cell Differentiation in the Skin 10.1016/s0092-8674(01)00336-1 hsa04310 Wnt signaling pathway 1499 CXCL1 GROa; MGSA C-X-C Motif Chemokine Ligand 1 Has chemotactic activity for neutrophils. May play a role in inflammation and exerts its effects on endothelial cells in an autocrine fashion. senescence-associated secretory phenotype Homo sapiens The Inflammatory Microenvironment of the Aging Prostate Facilitates Cellular Proliferation and Hypertrophy 10.1016/j.cyto.2008.05.012 hsa04064 NF-kappa B signaling pathway 2919 CXCL12 SDF-1a; SDF-1b C-X-C Motif Chemokine Ligand 12 Chemoattractant active on T-lymphocytes and monocytes but not neutrophils. Activates the C-X-C chemokine receptor CXCR4 to induce a rapid and transient rise in the level of intracellular calcium ions and chemotaxis. senescence-associated secretory phenotype Homo sapiens The Inflammatory Microenvironment of the Aging Prostate Facilitates Cellular Proliferation and Hypertrophy 10.1016/j.cyto.2008.05.012 hsa04064 NF-kappa B signaling pathway 6387 CXCL2 MIP-2a; MIP2A C-X-C Motif Chemokine Ligand 2 Produced by activated monocytes and neutrophils and expressed at sites of inflammation. senescence-associated secretory phenotype Homo sapiens The Inflammatory Microenvironment of the Aging Prostate Facilitates Cellular Proliferation and Hypertrophy 10.1016/j.cyto.2008.05.012 hsa04064 NF-kappa B signaling pathway 2920 CXCL5 ENA-78; SCYB5 C-X-C Motif Chemokine Ligand 5 Involved in neutrophil activation. senescence-associated secretory phenotype Homo sapiens The Inflammatory Microenvironment of the Aging Prostate Facilitates Cellular Proliferation and Hypertrophy 10.1016/j.cyto.2008.05.012 unknown Unknown 6374 CXCL6 SCYB6; GCP2 C-X-C Motif Chemokine Ligand 6 Chemotactic for neutrophil granulocytes. Signals through binding and activation of its receptors (CXCR1 and CXCR2). senescence-associated secretory phenotype Homo sapiens The Inflammatory Microenvironment of the Aging Prostate Facilitates Cellular Proliferation and Hypertrophy 10.1016/j.cyto.2008.05.012 unknown Unknown 6372 CXCL8 LYNAP; SCYB8 C-X-C Motif Chemokine Ligand 8 IL-8 is a chemotactic factor that attracts neutrophils, basophils, and T-cells, but not monocytes. It is also involved in neutrophil activation. It is released from several cell types in response to an inflammatory stimulus. senescence-associated secretory phenotype Homo sapiens Activation profile of CXCL8-stimulated neutrophils and aging 10.1016/j.cyto.2013.01.016 hsa04218 Cellular senescence 3576 CYCS THC4 Cytochrome C Plays a role in apoptosis. Suppression of the anti-apoptotic members or activation of the pro-apoptotic members of the Bcl-2 family leads to altered mitochondrial membrane permeability resulting in release of cytochrome c into the cytosol. Binding of cytochrome c to Apaf-1 triggers the activation of caspase-9, which then accelerates apoptosis by activating other caspases. cellular senescence Homo sapiens SQSTM1/p62 and PPARGC1A/PGC-1alpha at the interface of autophagy and vascular senescence 10.1080/15548627.2019.1659612 hsa04115 p53 signaling pathway 54205 DBN1 D0S117E drebrin 1 DBN1 is thought to be involved in neuronal growth. loss of proteostasis Homo sapiens Coordinated gene expression of neuroinflammatory and cell signaling markers in dorsolateral prefrontal cortex during human brain development and aging 10.1371/journal.pone.0110972 unknown Unknown 1627 DCTN1 DAP-150 Dynactin Subunit 1 DCTN1 plays a key role in dynein-mediated retrograde transport of vesicles and organelles along microtubules by recruiting and tethering dynein to microtubules. Binds to both dynein and microtubules providing a link between specific cargos, microtubules and dynein. Essential for targeting dynein to microtubule plus ends, recruiting dynein to membranous cargos and enhancing dynein processivity (the ability to move along a microtubule for a long distance without falling off the track). Can also act as a brake to slow the dynein motor during motility along the microtubule (PubMed:25185702). Can regulate microtubule stability by promoting microtubule formation, nucleation and polymerization and by inhibiting microtubule catastrophe in neurons. Inhibits microtubule catastrophe by binding both to microtubules and to tubulin, leading to enhanced microtubule stability along the axon (PubMed:23874158). Plays a role in metaphase spindle orientation (PubMed:22327364). Plays a role in centriole cohesion and subdistal appendage organization and function. Its recruitment to the centriole in a KIF3A-dependent manner is essential for the maintenance of centriole cohesion and the formation of subdistal appendage. Also required for microtubule anchoring at the mother centriole (PubMed:23386061). Plays a role in primary cilia formation. others Homo sapiens Dynactin pathway-related gene expression is altered by aging, but not by vitrification 10.1016/j.reprotox.2019.06.011 H00058 Amyotrophic lateral sclerosis (ALS) 1639 DDIT3 CHOP10; GADD153; CHOP DNA-damage-inducible transcript 3 DDIT3 prevents transcription in response to DNA damage. It also appears to be related to apoptosis. genomic instability Homo sapiens Expression of the Pro-Apoptotic Gene gadd153/chop Is Elevated in Liver With Aging and Sensitizes Cells to Oxidant Injury 10.1074/jbc.M300677200 hsa04010 MAPK signaling pathway 1649 DDX58 RIG-I; RIG1; RIGI DExD/H-box helicase 58 Aging compromises both the primary and secondary RIG-I signaling pathways that govern expression of type I IFN genes, thereby impairing antiviral resistance to IAV. NF-κB related gene Homo sapiens Aging impairs both primary and secondary RIG-I signaling for interferon induction in human monocytes 10.1126/scisignal.aan2392 hsa04064 NF-kappa B signaling pathway 23586 DGAT1 Diglyceride Acyltransferase diacylglycerol O-acyltransferase 1 Catalyzes the terminal and only committed step in triacylglycerol synthesis by using diacylglycerol and fatty acyl CoA as substrates. In contrast to DGAT2 it is not essential for survival. May be involved in VLDL (very low density lipoprotein) assembly. In liver, plays a role in esterifying exogenous fatty acids to glycerol. Functions as the major acyl-CoA retinol acyltransferase (ARAT) in the skin, where it acts to maintain retinoid homeostasis and prevent retinoid toxicity leading to skin and hair disorders. others Homo sapiens Acyl coenzyme A dependent retinol esterification by acyl coenzyme A: diacylglycerol acyltransferase 1. 10.1016/j.bbalip.2005.09.003 unknown Unknown 8694 DLAT PBC; E2 dihydrolipoamide S-acetyltransferase The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2), and thereby links the glycolytic pathway to the tricarboxylic cycle. mitochondrial dysfunction Homo sapiens Proteomics and metabolomics identify molecular mechanisms of aging potentially predisposing for chronic lymphocytic leukemia 10.1074/mcp.RA117.000425 unknown Unknown 1737 DLL3 SCDO1 delta-like 3 (Drosophila) DLL3 has been linked to development and neurogenesis. stem cell exhaustion Homo sapiens Novel Mutations in DLL3, a Somitogenesis Gene Encoding a Ligand for the Notch Signalling Pathway, Cause a Consistent Pattern of Abnormal Vertebral Segmentation in Spondylocostal Dysostosis 10.1136/jmg.40.5.333 hsa04330 Notch signaling pathway 10683 E2F1 RBP3 E2F transcription factor 1 Transcription activator that binds DNA cooperatively with DP proteins through the E2 recognition site, 5'-TTTC[CG]CGC-3' found in the promoter region of a number of genes whose products are involved in cell cycle regulation or in DNA replication. genomic instability Homo sapiens E2F transcription factor action, regulation and possible role in human cancer 10.1046/j.1365-2184.1997.00085.x hsa04218 Cellular senescence 1869 EDARADD ECTD11B; ED3; EDA3 EDAR associated death domain The methylation of site--in the promoters of the EDARADD genes--is linear with age over a range of five decades, which could be a model to estimate the age of a person, based on a biological sample alone. NF-κB related gene Homo sapiens Epigenetic predictor of age 10.1371/journal.pone.0014821 hsa04064 NF-kappa B signaling pathway 128178 EEF1A1 EF1A; EEF1A; LENG7 eukaryotic translation elongation factor 1 alpha 1 EEF1A1 is involved in the binding of tRNA to ribosomes during protein synthesis. This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis. With PARP1 and TXK, forms a complex that acts as a T helper 1 (Th1) cell-specific transcription factor and binds the promoter of IFN-gamma to directly regulate its transcription, and is thus involved importantly in Th1 cytokine production. genomic instability Homo sapiens Nerve growth factor specifically stimulates translation of eukaryotic elongation factor 1A-1 (eEF1A-1) mRNA by recruitment to polyribosomes in PC12 cells 10.1074/jbc.M111782200 unknown Unknown 1915 EEF1E1 minoacyl TRNA Synthetase Complex-Interacting Multifunctional Protein 3 eukaryotic translation elongation factor 1 epsilon 1 Positive modulator of ATM response to DNA damage. genomic instability Homo sapiens Dissection of the structural organization of the aminoacyl-tRNA synthetase complex 10.1074/jbc.M809636200 unknown Unknown 9521 EEF2 EEF-2; EF2 eukaryotic translation elongation factor 2 Age-dependent changes to EEF2 in rats, which could account for the decline in protein synthesis in old animals. loss of proteostasis Homo sapiens Elongation factor 2 diphthamide is critical for translation of two IRES-dependent protein targets, XIAP and FGF2, under oxidative stress conditions 10.1016/j.freeradbiomed.2013.10.015 unknown Unknown 1938 EFEMP1 EGF Containing Fibulin Extracellular Matrix Protein 1 EGF containing fibulin-like extracellular matrix protein 1 Binds EGFR, the EGF receptor, inducing EGFR autophosphorylation and the activation of downstream signaling pathways. May play a role in cell adhesion and migration. May function as a negative regulator of chondrocyte differentiation. In the olfactory epithelium, it may regulate glial cell migration, differentiation and the ability of glial cells to support neuronal neurite outgrowth. altered intercellular communication Homo sapiens EFEMP1 binds the EGF receptor and activates MAPK and Akt pathways in pancreatic carcinoma cells https://doi.org/10.1515/BC.2009.140 unknown Unknown 2202 EGF HOMG4; URG epidermal growth factor EGF stimulates the growth of various epidermal and epithelial tissues in vivo and in vitro and of some fibroblasts in cell culture. cellular senescence Homo sapiens EGF/EGFR Upregulates and Cooperates With Netrin-4 to Protect Glioblastoma Cells From DNA Damage-Induced Senescence 10.1186/s12885-018-5056-4 hsa04010 MAPK signaling pathway 1950 EGFR ERBB1 epidermal growth factor receptor Receptor tyrosine kinase binding ligands of the EGF family and activating several signaling cascades to convert extracellular cues into appropriate cellular responses. cellular senescence Homo sapiens Mechanisms of Skin Aging Induced by EGFR Inhibitors 10.1007/s00520-016-3254-7 hsa04010 MAPK signaling pathway 1956 EGR1 ZNF225; AT225 early growth response 1 Transcriptional regulator. Recognizes and binds to the DNA sequence 5'-GCG(T/G)GGGCG-3'(EGR-site) in the promoter region of target genes. cellular senescence Homo sapiens Early Life Stress and Epigenetics in Late-onset Alzheimer's Dementia: A Systematic Review 10.2174/1389202919666171229145156 hsa04912 GnRH signaling pathway 1958 EHMT1 Histone H3-K9 Methyltransferase 5 histone-lysine N-methyltransferase EHMT1 Histone methyltransferase that specifically mono- and dimethylates 'Lys-9' of histone H3 (H3K9me1 and H3K9me2, respectively) in euchromatin. H3K9me represents a specific tag for epigenetic transcriptional repression by recruiting HP1 proteins to methylated histones. Also weakly methylates 'Lys-27' of histone H3 (H3K27me). Also required for DNA methylation, the histone methyltransferase activity is not required for DNA methylation, suggesting that these 2 activities function independently. Probably targeted to histone H3 by different DNA-binding proteins like E2F6, MGA, MAX and/or DP1. During G0 phase, it probably contributes to silencing of MYC- and E2F-responsive genes, suggesting a role in G0/G1 transition in cell cycle. In addition to the histone methyltransferase activity, also methylates non-histone proteins: mediates dimethylation of 'Lys-373' of p53/TP53. epigenetic alterations Homo sapiens A complex with chromatin modifiers that occupies E2F- and Myc-responsive genes in G0 cells 10.1126/science.1069861 hsa04211 Longevity regulating pathway 79813 EHMT2 Histone-Lysine N-Methyltransferase EHMT2 euchromatic histone lysine methyltransferase 2 Histone methyltransferase that specifically mono- and dimethylates 'Lys-9' of histone H3 (H3K9me1 and H3K9me2, respectively) in euchromatin. H3K9me represents a specific tag for epigenetic transcriptional repression by recruiting HP1 proteins to methylated histones. Also mediates monomethylation of 'Lys-56' of histone H3 (H3K56me1) in G1 phase, leading to promote interaction between histone H3 and PCNA and regulating DNA replication. Also weakly methylates 'Lys-27' of histone H3 (H3K27me). Also required for DNA methylation, the histone methyltransferase activity is not required for DNA methylation, suggesting that these 2 activities function independently. Probably targeted to histone H3 by different DNA-binding proteins like E2F6, MGA, MAX and/or DP1. May also methylate histone H1. In addition to the histone methyltransferase activity, also methylates non-histone proteins: mediates dimethylation of 'Lys-373' of p53/TP53. Also methylates CDYL, WIZ, ACIN1, DNMT1, HDAC1, ERCC6, KLF12 and itself. epigenetic alterations Homo sapiens The G9a gene in the human major histocompatibility complex encodes a novel protein containing ankyrin-like repeats 10.1042/bj2900811 hsa04211 Longevity regulating pathway 10919 EIF4E MRNA Cap-Binding Protein eukaryotic translation initiation factor 4E Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures. Component of the CYFIP1-EIF4E-FMR1 complex which binds to the mRNA cap and mediates translational repression. In the CYFIP1-EIF4E-FMR1 complex this subunit mediates the binding to the mRNA cap. others Homo sapiens Translational homeostasis via the mRNA cap-binding protein, eIF4E 10.1016/j.molcel.2012.04.004 hsa04211 Longevity regulating pathway 1977 EIF4E1B Eukaryotic Translation Initiation Factor 4E Family Member 1B eukaryotic translation initiation factor 4E type 1B Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structure. others Homo sapiens Phylogenetic analysis of eIF4E-family members 10.1186/1471-2148-5-48 hsa04211 Longevity regulating pathway 253314 EIF4E2 MRNA Cap-Binding Protein Type 3 eukaryotic translation initiation factor 4E type 2 Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation. Acts as a repressor of translation initiation. In contrast to EIF4E, it is unable to bind eIF4G (EIF4G1, EIF4G2 or EIF4G3), suggesting that it acts by competing with EIF4E and block assembly of eIF4F at the cap. others Homo sapiens Cloning and characterization of 4EHP, a novel mammalian eIF4E-related cap-binding protein 10.1074/jbc.273.21.13104 hsa04211 Longevity regulating pathway 9470 EIF4EBP1 Eukaryotic Translation Initiation Factor 4E-Binding Protein 1 eukaryotic translation initiation factor 4E-binding protein 1 Repressor of translation initiation that regulates EIF4E activity by preventing its assembly into the eIF4F complex: hypophosphorylated form competes with EIF4G1/EIF4G3 and strongly binds to EIF4E, leading to repress translation. In contrast, hyperphosphorylated form dissociates from EIF4E, allowing interaction between EIF4G1/EIF4G3 and EIF4E, leading to initiation of translation. Mediates the regulation of protein translation by hormones, growth factors and other stimuli that signal through the MAP kinase and mTORC1 pathways. others Homo sapiens Insulin-dependent stimulation of protein synthesis by phosphorylation of a regulator of 5'-cap function 10.1038/371762a0 hsa04211 Longevity regulating pathway 1978 EIF5A2 Eukaryotic Initiation Factor 5A eukaryotic translation initiation factor 5A2 mRNA-binding protein involved in translation elongation. Has an important function at the level of mRNA turnover, probably acting downstream of decapping. Involved in actin dynamics and cell cycle progression, mRNA decay and probably in a pathway involved in stress response and maintenance of cell wall integrity. Functions as a regulator of apoptosis. Mediates effects of polyamines on neuronal process extension and survival. May play an important role in brain development and function, and in skeletal muscle stem cell differentiation. loss of proteostasis Homo sapiens Identification and characterization of eukaryotic initiation factor 5A-2 10.1046/j.1432-1033.2003.03806.x unknown Unknown 56648 ELN WBS; WS; SVAS elastin ELN is structural protein that may be related to arterial morphogenesis. altered intercellular communication Homo sapiens Multisystem Study of 20 Older Adults With Williams Syndrome 10.1002/ajmg.a.30400 hsa04151 PI3K-Akt signaling pathway 2006 EMD STA; LEMD5 emerin The functions of EMD in the nuclear lamina may indicate a role for EMD in ageing and have roles in chromatin organization, gene regulation and signal transduction. others Homo sapiens The Nuclear Lamina Comes of Age 10.1038/nrm1550 unknown Unknown 2010 ENO1 ENO1L1; HEL-S-17 enolase 1 Glycolytic enzyme the catalyzes the conversion of 2-phosphoglycerate to phosphoenolpyruvate. In addition to glycolysis, involved in various processes such as growth control, hypoxia tolerance and allergic responses. others Homo sapiens Alcohol drinking exacerbates neural and behavioral pathology in the 3xTg-AD mouse model of Alzheimer's disease 10.1016/bs.irn.2019.10.017 hsa04066 HIF-1 signaling pathway 2023 ENO2 HEL-S-279; NSE enolase 2 Has neurotrophic and neuroprotective properties on a broad spectrum of central nervous system (CNS) neurons. others Homo sapiens Alcohol drinking exacerbates neural and behavioral pathology in the 3xTg-AD mouse model of Alzheimer's disease 10.1016/bs.irn.2019.10.017 hsa04066 HIF-1 signaling pathway 2026 EP300 p300; KAT3B E1A binding protein p300 EP300 mediates many transcriptional events including DNA repair.EP300 has been associated with several other proteins that may be involved in ageing, such as WRN. genomic instability Homo sapiens DNA Damage-Induced Translocation of the Werner Helicase Is Regulated by Acetylation 10.1074/jbc.M210479200 hsa04935 Growth hormone synthesis, secretion and action 2033 EPOR EPO-R erythropoietin receptor Receptor for erythropoietin. Mediates erythropoietin-induced erythroblast proliferation and differentiation. Upon EPO stimulation, EPOR dimerizes triggering the JAK2/STAT5 signaling cascade. cellular senescence Homo sapiens Erythropoietin Signaling Increases Choroidal Macrophages and Cytokine Expression, and Exacerbates Choroidal Neovascularization 10.1038/s41598-018-20520-z hsa04630 JAK-STAT signaling pathway 2057 EPS8 Epidermal Growth Factor Receptor Kinase Substrate 8 epidermal growth factor receptor pathway substrate 8 Stimulates guanine exchange activity of SOS1. May play a role in membrane ruffling and remodeling of the actin cytoskeleton. In the cochlea, is required for stereocilia maintenance in adult hair cells. others Homo sapiens The eps8 family of proteins links growth factor stimulation to actin reorganization generating functional redundancy in the Ras/Rac pathway 10.1091/mbc.E03-06-0427 unknown Unknown 2059 ERBB2 HER2; NGL erb-b2 receptor tyrosine kinase 2 Protein tyrosine kinase that is part of several cell surface receptor complexes, but that apparently needs a coreceptor for ligand binding. Essential component of a neuregulin-receptor complex, although neuregulins do not interact with it alone. others Homo sapiens Premature Senescence Is a Primary Fail-Safe Mechanism of ERBB2-driven Tumorigenesis in Breast Carcinoma Cells PMID: 15705882 hsa04010 MAPK signaling pathway 2064 ERCC1 RAD10 excision repair cross-complementation group 1 ERCC1 has a role in DNA repair in association with the other ERCC proteins. genomic instability Homo sapiens Formation of a Ternary Complex by Human XPA, ERCC1, and ERCC4(XPF) Excision Repair Proteins 10.1073/pnas.91.11.5017 unknown Unknown 2067 ERCC2 CXPD; XPD excision repair cross-complementation group 2 ATP-dependent 5'-3' DNA helicase, component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to CAK, in RNA transcription by RNA polymerase II. genomic instability Homo sapiens The Involvement of ERCC2/XPD and ERCC6/CSB Wild Type Alleles in Protection Against Aging and Cancer 10.2174/1874609810666170707101548 unknown Unknown 2068 ERCC3 XPB; BTF2; RAD25 excision repair cross-complementation group 3 ERCC3 is an ATP-dependent 3'-5' directed DNA helicase involved in basal RNA transcription and the nucleotide excision repair (NER) pathway. genomic instability Homo sapiens Telomere Attrition and Genomic Instability in Xeroderma Pigmentosum Type-B Deficient Fibroblasts Under Oxidative Stress 10.1111/j.1582-4934.2009.00945.x unknown Unknown 2071 ERCC4 ERCC Excision Repair 4; Endonuclease Catalytic Subunit excision repair cross-complementation group 4 Catalytic component of a structure-specific DNA repair endonuclease responsible for the 5-prime incision during DNA repair. Involved in homologous recombination that assists in removing interstrand cross-link. genomic instability Homo sapiens Mammalian BTBD12/SLX4 assembles a Holliday junction resolvase and is required for DNA repair 10.1016/j.cell.2009.06.030 unknown Unknown 2072 ERCC5 ERCM2; XPGC excision repair cross-complementation group 5 ERCC5 may reduce endogenous DNA damage and attend therapy for human progeroid genome instability syndromes. genomic instability Homo sapiens Human xeroderma pigmentosum group G gene encodes a DNA endonuclease 10.1093/nar/22.16.3312 unknown Unknown 2073 ERCC6 CSB; RAD26; ARMD5 excision repair cross-complementation group 6 Mutant for ERCC6 and XPA die before weaning and display some signs of premature ageing included stunted growth, neurological dysfunction, retinal degeneration, cachexia, and kyphosis. others Homo sapiens Cockayne syndrome group B cellular and biochemical functions 10.1086/380399 unknown Unknown 2074 ERCC8 CKN1; CSA excision repair cross-complementation group 8 Substrate-recognition component of the CSA complex, a DCX (DDB1-CUL4-X-box) E3 ubiquitin-protein ligase complex, involved in transcription-coupled nucleotide excision repair. genomic instability Homo sapiens Two Novel Heterozygous Mutations in ERCC8 Cause Cockayne Syndrome in a Chinese Patient 10.1016/j.pediatrneurol.2015.06.006 unknown Unknown 1161 ESR1 NR3A1; Era; ESR estrogen receptor 1 ESR1 is a transcription factor that mediates the actions of estrogen. Mice without ESR1 were infertile and showed a variety of changes. genomic instability Homo sapiens Age-dependent Methylation of ESR1 Gene in Prostate Cancer 10.1016/j.bbrc.2004.06.164 unknown Unknown 2099 FADS1 D5D; FADS6; FADSD5 fatty acid desaturase 1 Long-chain polyunsaturated fatty acids (LCPUFAs) biosynthetic capacity is regulated by FADS1 polymorphisms and decreased by aging in FADS1 C allele carriers. others Homo sapiens Aging and FADS1 polymorphisms decrease the biosynthetic capacity of long-chain PUFAs: A human trial using [U- 13 C]linoleic acid 10.1016/j.plefa.2019.07.003 unknown Unknown 3992 FAS CD95; APO-1; FAS1 fas cell surface death receptor Fas-mediated apoptosis has a role in aging of human epidermis. Epidermal Fas expression and apoptosis are increased in aged human skin. others Homo sapiens Aging of Human Epidermis: Reversal of Aging Changes Correlates With Reversal of Keratinocyte Fas Expression and Apoptosis 10.1093/gerona/59.5.b411 hsa04115 p53 signaling pathway 355 FBP1 FBP fructose-bisphosphatase 1 Catalyzes the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate in the presence of divalent cations, acting as a rate-limiting enzyme in gluconeogenesis. Plays a role in regulating glucose sensing and insulin secretion of pancreatic beta-cells. others Homo sapiens Common and cell type-specific responses of human cells to mitochondrial dysfunction 10.1016/j.yexcr.2004.09.006 hsa04910 Insulin signaling pathway 2203 FEN1 FEN-1; MF1; RAD2 flap structure-specific endonuclease 1 Involved in DNA processing, FEN-1 removes 5' overhanging flaps in DNA repair and processes the 5' ends of Okazaki fragments in lagging strand DNA synthesis. genomic instability Homo sapiens Structure of the DNA Repair and Replication Endonuclease and Exonuclease FEN-1: Coupling DNA and PCNA Binding to FEN-1 Activity 10.1016/s0092-8674(00)81789-4 unknown Unknown 2237 FGF21 FGF-21 fibroblast growth factor 21 Stimulates glucose uptake in differentiated adipocytes via the induction of glucose transporter SLC2A1/GLUT1 expression (but not SLC2A4/GLUT4 expression). Activity requires the presence of KLB. deregulated nutrient sensing Homo sapiens FGF-21 as a novel metabolic regulator 10.1172/JCI23606 hsa04010 MAPK signaling pathway 26291 FGF23 Tumor-Derived Hypophosphatemia Inducing Factor fibroblast growth factor 23 Regulator of phosphate homeostasis. Inhibits renal tubular phosphate transport by reducing SLC34A1 levels. Upregulates EGR1 expression in the presence of KL. Acts directly on the parathyroid to decrease PTH secretion. Regulator of vitamin-D metabolism. Negatively regulates osteoblast differentiation and matrix mineralization. others Homo sapiens FGF-23 inhibits renal tubular phosphate transport and is a PHEX substrate https://doi.org/10.1006/bbrc.2001.5084 hsa04010 MAPK signaling pathway 8074 FGF7 HBGF-7; KGF fibroblast growth factor 7 Hominis Placenta (HP) treatment significantly increased the expression of FGF-7, which plays pivotal roles to maintain anagen phase both protein and mRNA levels. senescence-associated secretory phenotype Homo sapiens Hominis Placenta facilitates hair re-growth by upregulating cellular proliferation and expression of fibroblast growth factor-7 10.1186/s12906-016-1180-3 hsa04010 MAPK signaling pathway 2252 FGFR1 CEK; FLG; N-SAM fibroblast growth factor receptor 1 FGFR1 is the receptor of the fibroblast growth factor. altered intercellular communication Homo sapiens Attenuation of FGF Signalling in Beta-Cells Leads to Diabetes 10.1038/35048589 hsa04010 MAPK signaling pathway 2260 FGFR3 JTK4 Fibroblast Growth Factor Receptor 3 Tyrosine-protein kinase that acts as cell-surface receptor for fibroblast growth factors and plays an essential role in the regulation of cell proliferation, differentiation and apoptosis. Plays an essential role in the regulation of chondrocyte differentiation, proliferation and apoptosis, and is required for normal skeleton development. Regulates both osteogenesis and postnatal bone mineralization by osteoblasts. Promotes apoptosis in chondrocytes, but can also promote cancer cell proliferation. Required for normal development of the inner ear. Phosphorylates PLCG1, CBL and FRS2. Ligand binding leads to the activation of several signaling cascades. Activation of PLCG1 leads to the production of the cellular signaling molecules diacylglycerol and inositol 1,4,5-trisphosphate. Phosphorylation of FRS2 triggers recruitment of GRB2, GAB1, PIK3R1 and SOS1, and mediates activation of RAS, MAPK1/ERK2, MAPK3/ERK1 and the MAP kinase signaling pathway, as well as of the AKT1 signaling pathway. Plays a role in the regulation of vitamin D metabolism. Mutations that lead to constitutive kinase activation or impair normal FGFR3 maturation, internalization and degradation lead to aberrant signaling. Over-expressed or constitutively activated FGFR3 promotes activation of PTPN11/SHP2, STAT1, STAT5A and STAT5B. Secreted isoform 3 retains its capacity to bind FGF1 and FGF2 and hence may interfere with FGF signaling. others Homo sapiens Hepatic gene body hypermethylation is a shared epigenetic signature of murine longevity 10.1371/journal.pgen.1007766 hsa04010 MAPK signaling pathway 2261 FLT1 VEGFR1; FLT fms-related tyrosine kinase 1 It is involved in signalling cascade. epigenetic alterations Homo sapiens Aging and Orchidectomy Modulate Expression of VEGF Receptors (Flt-1 and Flk-1) on Corpus Cavernosum of the Rat 10.1196/annals.1354.020 unknown Unknown 2321 FOS P55 FBJ murine osteosarcoma viral oncogene homolog Nuclear phosphoprotein which forms a tight but non-covalently linked complex with the JUN/AP-1 transcription factor. In the heterodimer, FOS and JUN/AP-1 basic regions each seems to interact with symmetrical DNA half sites. cellular senescence Homo sapiens An altered repertoire of fos/jun (AP-1) at the onset of replicative senescence 10.1016/0014-4827(92)90415-5 hsa04935 Growth hormone synthesis, secretion and action 2353 FOXL2 PINTO Forkhead Box Protein L2 Transcriptional regulator. Critical factor essential for ovary differentiation and maintenance, and repression of the genetic program for somatic testis determination. Prevents trans-differentiation of ovary to testis through transcriptional repression of the Sertoli cell-promoting gene SOX9 (By similarity). Has apoptotic activity in ovarian cells. Suppresses ESR1-mediated transcription of PTGS2/COX2 stimulated by tamoxifen (By similarity). Is a regulator of CYP19 expression (By similarity). Participates in SMAD3-dependent transcription of FST via the intronic SMAD-binding element (By similarity). Is a transcriptional repressor of STAR. Activates SIRT1 transcription under cellular stress conditions. Activates transcription of OSR2. others Homo sapiens Transcriptional factor FOXL2 interacts with DP103 and induces apoptosis. 10.1016/j.bbrc.2005.08.184 unknown Unknown 668 FOXM1 HFH-11; HNF-3 forkhead box M1 Increased Foxm1b levels are essential for GH to stimulate hepatocyte proliferation. Increased expression of FOXM1 in old mice restored hepatocyte proliferation to levels found in young animals. deregulated nutrient sensing Homo sapiens FoxM1 repression during human aging leads to mitotic decline and aneuploidy-driven full senescence 10.1038/s41467-018-05258-6 hsa04218 Cellular senescence 2305 FOXO1 FKH1; FKHR; FOXO1A forkhead box O1 FOXO1 negatively regulates skeletal muscle mass and type I fiber gene expression and leads to impaired skeletal muscle function. others Homo sapiens Fox's in development and disease 10.1016/S0168-9525(03)00111-2 hsa04211 Longevity regulating pathway 2308 FOXO3 AF6q21; FOXO2; FKHRL1 forkhead box O3 A transcription factor of the Fox family, FOXO3, is crucial in development. others Homo sapiens Fox's in Development and Disease 10.1016/S0168-9525(03)00111-2 hsa04211 Longevity regulating pathway 2309 FOXO4 AFX1; MLLT7 forkhead box O4 FOXO4 plays a role in development and in insulin (INS) signalling. deregulated nutrient sensing Homo sapiens Targeted Apoptosis of Senescent Cells Restores Tissue Homeostasis in Response to Chemotoxicity and Aging 10.1016/j.cell.2017.02.031 hsa04068 FoxO signaling pathway 4303 GAPDH G3PD glyceraldehyde-3-phosphate dehydrogenase Has both glyceraldehyde-3-phosphate dehydrogenase and nitrosylase activities, thereby playing a role in glycolysis and nuclear functions, respectively. Participates in nuclear events including transcription, RNA transport, DNA replication and apoptosis. others Homo sapiens Ishemia-reperfusion enhances GAPDH nitration in aging skeletal muscle 10.18632/aging.100394 hsa04066 HIF-1 signaling pathway 2597 GCK HHF3; HKIV glucokinase Catalyzes the phosphorylation of hexose, such as D-glucose, D-fructose and D-mannose, to hexose 6-phosphate. others Homo sapiens GCK gene-body hypomethylation is associated with the risk of coronary heart disease 10.1155/2014/151723 hsa04910 Insulin signaling pathway 2645 GCLC Gamma-Glutamylcysteine Synthetase glutamate-cysteine ligase, catalytic subunit Glutamate-cysteine ligase, also known as gamma-glutamylcysteine synthetase is the first rate-limiting enzyme of glutathione synthesis. The enzyme consists of two subunits, a heavy catalytic subunit and a light regulatory subunit. This locus encodes the catalytic subunit, while the regulatory subunit is derived from a different gene located on chromosome 1p22-p21. Mutations at this locus have been associated with hemolytic anemia due to deficiency of gamma-glutamylcysteine synthetase and susceptibility to myocardial infarction. loss of proteostasis Homo sapiens Association of polymorphisms of glutamate-cystein ligase and microsomal triglyceride transfer protein genes in non-alcoholic fatty liver disease 10.1111/j.1440-1746.2009.06001.x unknown Unknown 2729 GCLM Gamma-Glutamylcysteine Synthetase Regulatory Subunit glutamate-cysteine ligase, modifier subunit Glutamate-cysteine ligase, also known as gamma-glutamylcysteine synthetase, is the first rate limiting enzyme of glutathione synthesis. The enzyme consists of two subunits, a heavy catalytic subunit and a light regulatory subunit. Gamma glutamylcysteine synthetase deficiency has been implicated in some forms of hemolytic anemia. Alternative splicing results in multiple transcript variants encoding different isoforms. loss of proteostasis Homo sapiens Structure, function, and post-translational regulation of the catalytic and modifier subunits of glutamate cysteine ligase 10.1016/j.mam.2008.08.009 unknown Unknown 2730 GDF11 Bone Morphogenetic Protein 11 growth differentiation factor 11 Secreted signal that acts globally to specify positional identity along the anterior/posterior axis during development. May play critical roles in patterning both mesodermal and neural tissues and in establishing the skeletal pattern. Signals through activin receptors type-2, ACVR2A and ACVR2B, and activin receptors type-1, ACVR1B, ACVR1C and TGFBR1 leading to the phosphorylation of SMAD2 and SMAD3. others Homo sapiens Structural Basis for Potency Differences Between GDF8 and GDF11 10.1186/s12915-017-0350-1 unknown Unknown 10220 GDF15 MIC1; NAG-1; PDF growth differentiation factor 15 Both the intracellular GDF15 and the circulating mature GDF15 are implicated in biological processes, such as energy homeostasis and body weight regulation. senescence-associated secretory phenotype Homo sapiens Growth differentiation factor 15 (GDF15): A survival protein with therapeutic potential in metabolic diseases 10.1016/j.pharmthera.2019.02.008 unknown Unknown 9518 GH1 GH; IGHD2 growth hormone 1 It plays an important role in growth control. Its major role in stimulating body growth is to stimulate the liver and other tissues to secrete IGF-1. cellular senescence Homo sapiens Growth hormone secretion is diminished and tightly controlled in humans enriched for familial longevity 10.1111/acel.12519 hsa04935 Growth hormone synthesis, secretion and action 2688 GHR GHBP; GHIP growth hormone receptor Receptor for pituitary gland growth hormone involved in regulating postnatal body growth. On ligand binding, couples to the JAK2/STAT5 pathway. loss of proteostasis Homo sapiens Growth hormone receptor deficiency is associated with a major reduction in pro-aging signaling, cancer, and diabetes in humans 10.1126/scitranslmed.3001845 hsa04935 Growth hormone synthesis, secretion and action 2690 GHRH GHRF; GRF growth hormone releasing hormone GRF is released by the hypothalamus and acts on the adenohypophyse to stimulate the secretion of growth hormone. loss of proteostasis Homo sapiens In vivo semiquantification of hypothalamic growth hormone-releasing hormone (GHRH) output in humans: evidence for relative GHRH deficiency in aging 10.1210/jcem.84.10.6063 hsa04935 Growth hormone synthesis, secretion and action 2691 GHRHR GRFR growth hormone releasing hormone receptor Receptor for GRF, coupled to G proteins which activate adenylyl cyclase. Stimulates somatotroph cell growth, growth hormone gene transcription and growth hormone secretion. deregulated nutrient sensing Homo sapiens Familial Dwarfism Due to a Novel Mutation of the Growth Hormone-Releasing Hormone Receptor Gene 10.1210/jcem.84.3.5599 hsa04935 Growth hormone synthesis, secretion and action 2692 GPX1 Glutathione Peroxidase 1; GSHPX1; GPXD glutathione peroxidase 1 Overexpression of GPX1 in mice results in insulin (INS) resistance and obesity. deregulated nutrient sensing Homo sapiens Association of GPX1 and GPX4 polymorphisms with episodic memory and Alzheimer's disease 10.1016/j.neulet.2017.12.026 unknown Unknown 2876 GPX4 Phospholipid Hydroperoxide Glutathione Peroxidase glutathione peroxidase 4 Essential antioxidant peroxidase that directly reduces phospholipid hydroperoxide even if they are incorporated in membranes and lipoproteins. Can also reduce fatty acid hydroperoxide, cholesterol hydroperoxide and thymine hydroperoxide. Plays a key role in protecting cells from oxidative damage by preventing membrane lipid peroxidation. Required to prevent cells from ferroptosis, a non-apoptotic cell death resulting from an iron-dependent accumulation of lipid reactive oxygen species. Plays a role in a primary T-cell response to viral and parasitic infection by protecting T-cells from ferroptosis and by supporting T-cell expansion. Plays a role of glutathione peroxidase in platelets in the arachidonic acid metabolism. others Homo sapiens Regulation of Ferroptotic Cancer Cell Death by GPX4 10.1016/j.cell.2013.12.010 unknown Unknown 2879 GRB2 NCKAP2 growth factor receptor-bound protein 2 GRB2 has a role as a signal transducer of many pathways, including pathways and genes previously related to ageing such as INS/IGF1 signalling and SHC1. deregulated nutrient sensing Homo sapiens Feedback between p21 and reactive oxygen production is necessary for cell senescence 10.1038/msb.2010.5 hsa04910 Insulin signaling pathway 2885 GRIA2 GluA2 Glutamate Ionotropic Receptor AMPA Type Subunit 2 Receptor for glutamate that functions as ligand-gated ion channel in the central nervous system and plays an important role in excitatory synaptic transmission. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. Binding of the excitatory neurotransmitter L-glutamate induces a conformation change, leading to the opening of the cation channel, and thereby converts the chemical signal to an electrical impulse. The receptor then desensitizes rapidly and enters a transient inactive state, characterized by the presence of bound agonist. In the presence of CACNG4 or CACNG7 or CACNG8, shows resensitization which is characterized by a delayed accumulation of current flux upon continued application of glutamate. Through complex formation with NSG1, GRIP1 and STX12 controls the intracellular fate of AMPAR and the endosomal sorting of the GRIA2 subunit toward recycling and membrane targeting. others Homo sapiens Epigenetic-aging-signature to determine age in different tissues 10.18632/aging.100395 hsa04024 cAMP signaling pathway 2891 GRN PC Cell-Derived Growth Factor granulin Secreted protein that acts as a key regulator of lysosomal function and as a growth factor involved in inflammation, wound healing and cell proliferation. Regulates protein trafficking to lysosomes and, also the activity of lysosomal enzymes. Facilitates also the acidification of lysosomes, causing degradation of mature CTSD by CTSB. In addition, functions as wound-related growth factor that acts directly on dermal fibroblasts and endothelial cells to promote division, migration and the formation of capillary-like tubule structures. Also promotes epithelial cell proliferation by blocking TNF-mediated neutrophil activation preventing release of oxidants and proteases. Moreover, modulates inflammation in neurons by preserving neurons survival, axonal outgrowth and neuronal integrity. others Homo sapiens GRN variability contributes to sporadic frontotemporal lobar degeneration 10.3233/JAD-2010-1225 unknown Unknown 2896 GSK3A Glycogen Synthase Kinase-3 Alpha glycogen synthase kinase 3 alpha Constitutively active protein kinase that acts as a negative regulator in the hormonal control of glucose homeostasis, Wnt signaling and regulation of transcription factors and microtubules, by phosphorylating and inactivating glycogen synthase (GYS1 or GYS2), CTNNB1/beta-catenin, APC and AXIN1. Requires primed phosphorylation of the majority of its substrates. Contributes to insulin regulation of glycogen synthesis by phosphorylating and inhibiting GYS1 activity and hence glycogen synthesis. Regulates glycogen metabolism in liver, but not in muscle. May also mediate the development of insulin resistance by regulating activation of transcription factors. Acts as a regulator of autophagy by mediating phosphorylation of KAT5/TIP60 under starvation conditions, leading to activate KAT5/TIP60 acetyltransferase activity and promote acetylation of key autophagy regulators, such as ULK1 and RUBCNL/Pacer. deregulated nutrient sensing Homo sapiens Glycogen synthase kinase-3: properties, functions, and regulation 10.1021/cr000110o unknown Unknown 2931 GSK3B Glycogen Synthase Kinase 3 Beta; Serine/Threonine-Protein Kinase GSK3B glycogen synthase kinase 3 beta Adult overexpression of GSK3B in the brain of resulted in neurodegeneration. GSK-3beta has been postulated to mediate Alzheimer's disease tau hyperphosphorylation, beta-amyloid-induced neurotoxicity and presenilin-1 mutation pathogenic effects. others Homo sapiens Early Life Stress and Epigenetics in Late-onset Alzheimer's Dementia: A Systematic Review 10.2174/1389202919666171229145156 hsa04910 Insulin signaling pathway 2932 GSR Glutathione-Disulfide Reductase; GRase; GRD1 glutathione reductase GSR is involved in redox regulation and oxidative defence. others Homo sapiens Loss of glutathione redox homeostasis impairs proteostasis by inhibiting autophagy-dependent protein degradation 10.1038/s41418-018-0270-9 unknown Unknown 2936 GSS GSHS; GSH-S; Glutathione Synthase glutathione synthetase Mutations in the human GSS gene cause 5-oxoprolinuria. GSS is involved in redox regulation. others Homo sapiens Mutations in the Glutathione Synthetase Gene Cause 5-oxoprolinuria 10.1038/ng1196-361 unknown Unknown 2937 GSTA4 GTA4 glutathione S-transferase alpha 4 It is involved in oxidative protection as well as the removal of toxins and harmful metabolic by-products. altered intercellular communication Homo sapiens Glutathione S-transferase Isoenzymatic Response to Aging in Rat Cerebral Cortex and Cerebellum 10.1016/s0197-4580(02)00139-2 unknown Unknown 2941 GSTP1 GSTP; FAEES3; GST3 glutathione S-transferase pi 1 It is involved in oxidative protection, extend lifespan. epigenetic alterations Homo sapiens DNA methylation in repeat negative prostate biopsies as a marker of missed prostate cancer 10.1186/s13148-019-0746-6 unknown Unknown 2950 GTF2H2 BTF2; TFIIH; BTF2P44 general transcription factor IIH, polypeptide 2, 44kDa Transcription factor II H interacts with a variety of factors during transcription, suggesting that, in addition to its essential role in transcription initiation, it also participates as a regulatory factor. epigenetic alterations Homo sapiens The Transcriptional Complexity of the TFIIH Complex 10.1016/j.tig.2003.08.005 unknown Unknown 2966 H2AFX H2AX; H2A.X H2A histone family, member X H2AFX has been involved in DNA repair. genomic instability Homo sapiens Genomic Instability in Mice Lacking Histone H2AX 10.1126/science.1069398 unknown Unknown 3014 HBP1 HMG Box-Containing Protein 1 HMG-box transcription factor 1 HBP1 has been related to DNA unwinding and stress response. genomic instability Homo sapiens HBP1: a HMG box transcriptional repressor that is targeted by the retinoblastoma family 10.1101/gad.11.3.383 unknown Unknown 26959 HDAC1 HD1; GON-10; RPD3L1 histone deacetylase 1 HDAC1 performs the deacetylation of histones and is an important player in may processes such as development, transcriptional regulation, and cell cycle progression. epigenetic alterations Homo sapiens Histone Deacetylases (HDACs): Characterization of the Classical HDAC Family 10.1042/BJ20021321 hsa04110 Cell cycle 3065 HDAC2 RPD3; YAF1 histone deacetylase 2 HDAC2 performs the deacetylation of histones and is an important player in may processes such as development, transcriptional regulation, and cell cycle progression. cellular senescence Homo sapiens Histone Deacetylases (HDACs): Characterization of the Classical HDAC Family 10.1042/BJ20021321 hsa04110 Cell cycle 3066 HDAC3 SMAP45; HD3 histone deacetylase 3 Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. epigenetic alterations Homo sapiens Histone deacetylases (HDACs): characterization of the classical HDAC family 10.1042/BJ20021321 unknown Unknown 8841 HELLS PASG; SMARCA6; LSH helicase, lymphoid-specific The disruption of PASG (lsh), a SNF2-like factor that facilitates DNA methylation, causes global hypomethylation, developmental growth retardation and a premature aging phenotype. epigenetic alterations Homo sapiens Characterization of gene expression, genomic structure, and chromosomal localization of Hells (Lsh) 10.1006/geno.1998.5557 unknown Unknown 3070 HESX1 RPX; ANF HESX homeobox 1 HESX1 is an important regulator of development and, particularly, of pituitary development. others Homo sapiens Mutations in the homeobox gene HESX1/Hesx1 associated with septo-optic dysplasia in human and mouse 10.1038/477 hsa04550 Signaling pathways regulating pluripotency of stem cells 8820 HGF F-TCF; HGFB; HPTA hepatocyte growth factor HGF and bFGF derived from hADSCs improved ovarian function during natural aging via reduction of oxidative stress by activating the SIRT1/FOXO1 signaling pathway. senescence-associated secretory phenotype Homo sapiens HGF and BFGF Secretion by Human Adipose-Derived Stem Cells Improves Ovarian Function During Natural Aging via Activation of the SIRT1/FOXO1 Signaling Pathway 10.1159/000487559 hsa04151 PI3K-Akt signaling pathway 3082 HIC1 Zinc Finger And BTB Domain-Containing Protein 29 hypermethylated in cancer 1 Transcriptional repressor. Recognizes and binds to the consensus sequence '5-[CG]NG[CG]GGGCA[CA]CC-3'. May act as a tumor suppressor. May be involved in development of head, face, limbs and ventral body wall. Involved in down-regulation of SIRT1 and thereby is involved in regulation of p53/TP53-dependent apoptotic DNA-damage responses. The specific target gene promoter association seems to be depend on corepressors, such as CTBP1 or CTBP2 and MTA1. The regulation of SIRT1 transcription in response to nutrient deprivation seems to involve CTBP1. Involved in regulation of the Wnt signaling pathway probably by association with TCF7L2 and preventing TCF7L2 and CTNNB1 association with promoters of TCF-responsive genes. genomic instability Homo sapiens Tumor suppressor HIC1 directly regulates SIRT1 to modulate p53-dependent DNA-damage responses https://doi.org/10.1016/j.cell.2005.08.011 unknown Unknown 3090 HIF1A PASD8; MOP1 hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) Functions as a master transcriptional regulator of the adaptive response to hypoxia. others Homo sapiens Pathobiological Pseudohypoxia as a Putative Mechanism Underlying Myelodysplastic Syndromes 10.1158/2159-8290.CD-17-1203 hsa04066 HIF-1 signaling pathway 3091 HK3 HKIII; HXK3 hexokinase 3 Catalyzes the phosphorylation of hexose, such as D-glucose and D-fructose, to hexose 6-phosphate (D-glucose 6-phosphate and D-fructose 6-phosphate. others Homo sapiens ESR1, HK3 and BRSK1 gene variants are associated with both age at natural menopause and premature ovarian failure 10.1186/1750-1172-7-5 hsa04066 HIF-1 signaling pathway 3101 HMGB1 HMG3; SBP-1; DKFZp686A04236 high mobility group box 1 It is related to DNA unwinding, stress response, and maintenance of genome stability. genomic instability Homo sapiens High Mobility Group Protein B1 Enhances DNA Repair and Chromatin Modification After DNA Damage 10.1073/pnas.0803181105 hsa04140 Autophagy - animal 3146 HMGB2 HMG2 high mobility group box 2 HMGB2 has been related to DNA unwinding and stress response. genomic instability Homo sapiens HMGB2 expression is associated with transition from a quiescent to an activated state of adult neural stem cells 10.1002/dvdy.24559 unknown Unknown 3148 HOXB7 HOX2; HOX2C homeobox B7 It is crucial in morphogenesis and development. The expression of many HOX genes, including HOXB7, declines with age, even prior to adulthood. genomic instability Homo sapiens Do Longevity Assurance Genes Containing Hox Domains Regulate Cell Development via Ceramide Synthesis? 10.1016/s0014-5793(02)03248-9 unknown Unknown 3217 HOXC4 HOX3; HOX3E homeobox C4 Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. genomic instability Homo sapiens The Binding of Ku Antigen to Homeodomain Proteins Promotes Their Phosphorylation by DNA-dependent Protein Kinase 10.1074/jbc.M100768200 unknown Unknown 3221 HRAS P21ras harvey rat sarcoma viral oncogene homolog It is involved in the activation of Ras protein signal transduction. cellular senescence Homo sapiens Bladder Cancer and Genetic Mutations 10.1007/s12013-015-0574-z hsa04211 Longevity regulating pathway 3265 HSF1 HSTF1 heat shock transcription factor 1 It plays a critical role in regulating the transcription of hsp genes. HSF1 in aged rats exhibits a decreased ability to bind DNA. epigenetic alterations Homo sapiens Rethinking HSF1 in Stress, Development, and Organismal Health 10.1016/j.tcb.2017.08.002 unknown Unknown 3297 HSP90AA1 LAP2 heat shock protein 90kDa alpha (cytosolic), class A member 1 Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. others Homo sapiens Heat shock response and ageing: mechanisms and applications 10.1006/cbir.2001.0789 hsa04151 PI3K-Akt signaling pathway 3320 HSPA1A HSP72; HSP70 heat shock 70kDa protein 1A,tissue-specific Ensuring the correct folding of proteins. Acts as a cellular defense mechanism,the aging-associated variation of the levels of Hsp70 followed a different pattern in post-mitotic and mitotic tissues, being lower or higher in old comparing to adults, respectively. loss of proteostasis Homo sapiens Hsp70 Basal Levels, a Tissue Marker of the Rate of Aging and Longevity in 10.1016/j.exger.2016.08.013 hsa04010 MAPK signaling pathway 3303 HSPA1B HSP70-2; HSP72 heat shock 70kDa protein 1B Stress inducible, ATPase activity, tolerance of hyperthermia,ischemia/hypoxia, resistance to oxidative, UV and TNF stresses,protection against protein aggregation, regulation of HS response,protection of transcription/translation, tumorigenicity,antiapoptotic. loss of proteostasis Homo sapiens Paradoxical Increase of Heat-Shock Response With Age in a Substrain of F344 Rats: Comparison Between F344/DuCrj and F344/Jcl 10.1016/s0047-6374(02)00096-9 hsa04010 MAPK signaling pathway 3304 HSPA8 HSC71; HSC70; HSP73 heat shock 70kDa protein 8 This gene encodes a member of the heat shock protein 70 family, which contains both heat-inducible and constitutively expressed members. This protein belongs to the latter group, which are also referred to as heat-shock cognate proteins. It functions as a chaperone, and binds to nascent polypeptides to facilitate correct folding. It also functions as an ATPase in the disassembly of clathrin-coated vesicles during transport of membrane components through the cell. loss of proteostasis Homo sapiens Heat Shock Response and Ageing: Mechanisms and Applications 10.1006/cbir.2001.0789 hsa04010 MAPK signaling pathway 3312 HSPA9 GRP75; PBP74; HSPA9B heat shock 70kDa protein 9 (mortalin) HSPA9 influenced pre-messenger RNA splicing by modulating the inclusion of the exons. epigenetic alterations Homo sapiens Parkinson's Disease-Related Gene Variants Influence pre-mRNA Splicing Processes 10.1016/j.neurobiolaging.2016.07.014 unknown Unknown 3313 HSPD1 GroEL; HSP60; SPG13 heat shock 60kDa protein 1 (chaperonin) It is involve in the aging-related apoptotic process, promote aging. mitochondrial dysfunction Homo sapiens Age-related Alterations in Expression of Apoptosis Regulatory Proteins and Heat Shock Proteins in Rat Skeletal Muscle 10.1016/j.bbadis.2005.08.003 unknown Unknown 3329 HTRA2 Serine Proteinase OMI HtrA serine peptidase 2 Serine protease that shows proteolytic activity against a non-specific substrate beta-casein. Promotes or induces cell death either by direct binding to and inhibition of BIRC proteins (also called inhibitor of apoptosis proteins, IAPs), leading to an increase in caspase activity, or by a BIRC inhibition-independent, caspase-independent and serine protease activity-dependent mechanism. Cleaves THAP5 and promotes its degradation during apoptosis. Isoform 2 seems to be proteolytically inactive. loss of proteostasis Homo sapiens Characterization of a novel human serine protease that has extensive homology to bacterial heat shock endoprotease HtrA and is regulated by kidney ischemia 10.1074/jbc.275.4.2581 hsa04210 Apoptosis 27429 HTT IT15; HD huntingtin DeltaQ-htt expression in vitro increases autophagosome synthesis and stimulates the Atg5-dependent clearance of truncated N-terminal htt aggregates. loss of proteostasis Homo sapiens Loss of huntingtin-mediated BDNF gene transcription in Huntington's disease 10.1126/science.1059581 unknown Unknown 3064 IFNB1 Fibroblast Interferon interferon beta It has antiviral, antibacterial and anticancer activities. others Homo sapiens Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study 10.2337/dc10-0452 hsa04630 JAK-STAT signaling pathway 3456 IGF1 MGF insulin-like growth factor 1 (somatomedin C) The insulin-like growth factors, isolated from plasma, are structurally and functionally related to insulin but have a much higher growth-promoting activity. cellular senescence Homo sapiens Insulin-like Growth factor-1 Signaling in Cardiac Aging 10.1016/j.bbadis.2017.08.029 hsa04211 Longevity regulating pathway 3479 IGF1R CD221; JTK13 insulin-like growth factor 1 receptor Receptor tyrosine kinase which mediates actions of insulin-like growth factor 1 (IGF1). Binds IGF1 with high affinity and IGF2 and insulin (INS) with a lower affinity. others Homo sapiens β Cell Aging Markers Have Heterogeneous Distribution and Are Induced by Insulin Resistance 10.1016/j.cmet.2017.03.015 hsa04211 Longevity regulating pathway 3480 IGF2 C11orf43 insulin-like growth factor 2 The insulin-like growth factors possess growth-promoting activity. Major fetal growth hormone in mammals. Plays a key role in regulating fetoplacental development. cellular senescence Homo sapiens Insulin-like growth factors: actions on the skeleton 10.1530/JME-17-0298 hsa04010 MAPK signaling pathway 3481 IGFBP1 AFBP; IBP1; IGF-BP25 insulin like growth factor binding protein 1 As a downstream protein of Jagged1, IGFBP1 was correlated with the severity of coronary atherosclerosis in aging patients, and the increase of circulating IGFBP1 levels with aging may be an adaptive response to counter HCAEC senescence through Akt signaling. senescence-associated secretory phenotype Homo sapiens Role of IGFBP1 in the senescence of vascular endothelial cells and severity of aging?related coronary atherosclerosis 10.3892/ijmm.2019.4338 unknown Unknown 3484 IGFBP2 IGF-Binding Protein 2 insulin-like growth factor binding protein 2, 36kDa Inhibits IGF-mediated growth and developmental rates. IGF-binding proteins prolong the half-life of the IGFs and have been shown to either inhibit or stimulate the growth promoting effects of the IGFs on cell culture. They alter the interaction of IGFs with their cell surface receptors. others Homo sapiens Duplication of the IGFBP-2 gene in teleost fish: protein structure and functionality conservation and gene expression divergence 10.1371/journal.pone.0003926 unknown Unknown 3485 IGFBP3 IGFBP-3; BP-53 insulin-like growth factor binding protein 3 IGF-binding proteins prolong the half-life of the IGFs and have been shown to either inhibit or stimulate the growth promoting effects of the IGFs on cell culture. cellular senescence Homo sapiens IGFBP-3 Plays an Important Role in Senescence as an Aging Marker 10.1016/j.etap.2018.03.014 hsa04115 p53 signaling pathway 3486 IKBKB Inhibitor Of Nuclear Factor Kappa-B Kinase Subunit Beta inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta Serine kinase that plays an essential role in the NF-kappa-B signaling pathway which is activated by multiple stimuli such as inflammatory cytokines, bacterial or viral products, DNA damages or other cellular stresses. Acts as part of the canonical IKK complex in the conventional pathway of NF-kappa-B activation. Phosphorylates inhibitors of NF-kappa-B on 2 critical serine residues. altered intercellular communication Homo sapiens Ro52-mediated monoubiquitination of IKK{beta} down-regulates NF-{kappa}B signalling 10.1093/jb/mvp127 hsa04910 Insulin signaling pathway 3551 IKBKG IKK-Gamma Inhibitor Of Nuclear Factor Kappa B Kinase Regulatory Subunit Regulatory subunit of the IKK core complex which phosphorylates inhibitors of NF-kappa-B thus leading to the dissociation of the inhibitor/NF-kappa-B complex and ultimately the degradation of the inhibitor. Its binding to scaffolding polyubiquitin seems to play a role in IKK activation by multiple signaling receptor pathways. However, the specific type of polyubiquitin recognized upon cell stimulation (either 'Lys-63'-linked or linear polyubiquitin) and its functional importance is reported conflictingly. Also considered to be a mediator for TAX activation of NF-kappa-B. Could be implicated in NF-kappa-B-mediated protection from cytokine toxicity. Essential for viral activation of IRF3. Involved in TLR3- and IFIH1-mediated antiviral innate response; this function requires 'Lys-27'-linked polyubiquitination. NF-κB related gene Homo sapiens GSK-3β controls NF-kappaB activity via IKKγ/NEMO 10.1038/srep38553 hsa04064 NF-kappa B signaling pathway 8517 IL15 IL-15 interleukin 15 Endurance exercise attenuates age-associated changes to skin in humans and mice and exercise-induced IL-15 is a novel regulator of mitochondrial function in aging skin. senescence-associated secretory phenotype Homo sapiens Exercise-stimulated interleukin-15 is controlled by AMPK and regulates skin metabolism and aging 10.1111/acel.12341 hsa04060 Cytokine-cytokine receptor interaction 3600 IL1A IL-1A; IL1; IL1F1 interleukin 1 alpha Reduced IL1A diminished NF-κB transcriptional activity, which controls much of the SASP; exogenous IL1A restored IL6 secretion to rapamycin-treated cells. senescence-associated secretory phenotype Homo sapiens MTOR regulates the pro-tumorigenic senescence-associated secretory phenotype by promoting IL1A translation 10.1038/ncb3195 hsa05010 Alzheimer disease 3552 IL1B IL-1; IL1-BETA; IL1F2 interleukin 1 beta Aged adipose B cells (AABs) express IL-1R, and inhibition of IL-1 signaling reduces their proliferation and increases lipolysis in aging. senescence-associated secretory phenotype Homo sapiens Aging Induces an Nlrp3 Inflammasome-Dependent Expansion of Adipose B Cells That Impairs Metabolic Homeostasis 10.1016/j.cmet.2019.10.006 hsa04010 MAPK signaling pathway 3553 IL1R1 IL1R; IL1RA; P80 interleukin 1 receptor type 1 IL-1β during the early stages following chronic cerebral hypoperfusion impedes OPC recruitment via IL-1R1, which inhibits white matter repair and functional recovery. IL-1R1 inhibitors may have potential uses in the treatment of SIVD. NF-κB related gene Homo sapiens Interleukin-1β impedes oligodendrocyte progenitor cell recruitment and white matter repair following chronic cerebral hypoperfusion 10.1016/j.bbi.2016.09.024 hsa04064 NF-kappa B signaling pathway 3554 IL2 TCGF interleukin 2 Produced by T-cells in response to antigenic or mitogenic stimulation, this protein is required for T-cell proliferation and other activities crucial to regulation of the immune response. cellular senescence Homo sapiens Low-affinity TCR Engagement Drives IL-2-dependent Post-Thymic Maintenance of Naive CD4+ T Cells in Aged Humans 10.1111/acel.12353 hsa04630 JAK-STAT signaling pathway 3558 IL2RG SCIDX1; P64 interleukin 2 receptor, gamma Common subunit for the receptors for a variety of interleukins. others Homo sapiens Profile of Inflammation-associated genes during Hepatic Differentiation of Human Pluripotent Stem Cells 10.1016/j.dib.2015.10.023 hsa04630 JAK-STAT signaling pathway 3561 IL6 IL-6; BSF2; HGF interleukin 6 Transgenic mice expressing high levels of IL6 have a reduced growth rate and low levels of IGF1. IL-6-mediated decrease in IGF-I production represents a major mechanism by which chronic inflammation affects growth. deregulated nutrient sensing Homo sapiens Interleukin 6 Causes Growth Impairment in Transgenic Mice Through a Decrease in Insulin-Like Growth factor-I. A Model for Stunted Growth in Children With Chronic Inflammation 10.1172/JCI119207 hsa04218 Cellular senescence 3569 IL6ST GP130; HIES4; IL-6RB interleukin 6 signal transducer miR-126a-3p also modulates the expression of IRS1, IRS2, IL6ST and PIK3R2, all targets that enforce the hypothesis that senescent endothelial cells may reduce the proliferative ability and the stemness phenotype of bone marrow-derived mesenchymal stem cells. senescence-associated secretory phenotype Homo sapiens The senescent status of endothelial cells affects proliferation, inflammatory profile and SOX2 expression in bone marrow-derived mesenchymal stem cells 10.1016/j.exger.2019.02.014 hsa04630 Cytokine-cytokine receptor interaction 3572 IL7 IL-7 interleukin 7 It stimulates the proliferation of lymphoid progenitors, inhibit aging. cellular senescence Homo sapiens Age-associated Thymic Atrophy Is Linked to a Decline in IL-7 Production 10.1016/s0531-5565(01)00213-3 hsa04630 JAK-STAT signaling pathway 3574 IL7R CDW127 interleukin 7 receptor Receptor for interleukin-7. Also acts as a receptor for thymic stromal lymphopoietin (TSLP). cellular senescence Homo sapiens IL7R Gene Expression Network Associates With Human Healthy Ageing 10.1186/s12979-015-0048-6 hsa04630 JAK-STAT signaling pathway 3575 INS IDDM; ILPR insulin Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. cellular senescence Homo sapiens Brain Insulin Signalling, Glucose Metabolism and Females' Reproductive Aging: A Dangerous Triad in Alzheimer's Disease 10.1016/j.neuropharm.2018.01.044 hsa04211 Longevity regulating pathway 3630 INSR CD220; HHF5 insulin receptor Receptor tyrosine kinase which mediates the pleiotropic actions of insulin. Binding of insulin leads to phosphorylation of several intracellular substrates, including, insulin receptor substrates (IRS1, 2, 3, 4), SHC, GAB1, CBL and other signaling intermediates. cellular senescence Homo sapiens Cross-species Microarray Analysis With the OSCAR System Suggests an INSR->Pax6->NQO1 Neuro-Protective Pathway in Aging and Alzheimer's DiseaseThe Ubiquitin Ligase CHIP Integrates Proteostasis and Aging by Regulation of Insulin Receptor Turnover 10.1093/nar/gkm408 hsa04211 Longevity regulating pathway 3643 IRS1 HIRS-1 insulin receptor substrate 1 May mediate the control of various cellular processes by insulin. cellular senescence Homo sapiens A novel T608R missense mutation in insulin receptor substrate-1 identified in a subject with type 2 diabetes impairs metabolic insulin signaling 10.1210/jc.2002-020933 hsa04211 Longevity regulating pathway 3667 IRS2 IRS-2 insulin receptor substrate 2 May mediate the control of various cellular processes by insulin. cellular senescence Homo sapiens New amino acid substitutions in the IRS-2 gene in Finnish and Chinese subjects with late-onset type 2 diabetes 10.2337/diabetes.50.8.1949 hsa04211 Longevity regulating pathway 8660 IRS4 Pp160 insulin receptor substrate 4 It acts as an interface between multiple growth factor receptors possessing tyrosine kinase activity, such as insulin receptor, IGF1R and FGFR1, and a complex network of intracellular signaling molecules containing SH2 domains. It is involved in the IGF1R mitogenic signaling pathway. It promotes the AKT1 signaling pathway and BAD phosphorylation during insulin stimulation without activation of RPS6KB1 or the inhibition of apoptosis. altered intercellular communication Homo sapiens Characterization of insulin receptor substrate 4 in human embryonic kidney 293 cells 10.1074/jbc.273.17.10726 hsa04211 Longevity regulating pathway 728340 ITGA2 BR; CD49B; GPIa integrin subunit alpha 2 Overexpressed ITGA2 promoted the proliferation of ovarian cancer cells. ITGA2 regulated the phosphorylation of forkhead box O1 (FoxO1) by mediating AKT phosphorylation. senescence-associated secretory phenotype Homo sapiens Overexpressed ITGA2 contributes to paclitaxel resistance by ovarian cancer cells through the activation of the AKT/FoxO1 pathway 10.18632/aging.102954 hsa04151 PI3K-Akt signaling pathway 3673 JAK2 JTK10 janus kinase 2 Knockdown or pharmacological inhibition of the JAK-STAT enhances satellite stem cell division potential, resulting in better muscle regeneration. Upon JAK inhibition there was a reduction in inflammatory cytokines and chemokines. stem cell exhaustion Homo sapiens JAK Inhibition Alleviates the Cellular Senescence-Associated Secretory Phenotype and Frailty in Old Age 10.1073/pnas.1515386112 hsa04935 Growth hormone synthesis, secretion and action 3717 JUN c-Jun; AP-1 jun proto-oncogene AP-1's DNA-binding activity decreases with age. genomic instability Homo sapiens Increased Constitutive c-Jun N-terminal Kinase Signaling in Lacking Glutathione S-transferase Pi 10.1074/jbc.M301211200 hsa04310 Wnt signaling pathway 3725 JUND AP-1 jun D proto-oncogene His protein has been proposed to protect cells from p53-dependent senescence and apoptosis. Alternative translation initiation site usage results in the production of different isoforms. cellular senescence Homo sapiens Altered composition and DNA binding activity of the AP-1 transcription factor during the ageing of human fibroblasts 10.1016/s0047-6374(01)00319-0 hsa04010 MAPK signaling pathway 3727 KCNA3 Potassium Voltage-Gated Channel; Shaker-Related Subfamily; Member 3 potassium channel, voltage gated shaker related subfamily A, member 3 KCNA3 mediates the voltage-dependent potassium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a potassium-selective channel through which potassium ions may pass in accordance with their electrochemical gradient. altered intercellular communication Homo sapiens Confirmation of the assignment of the gene encoding Kv1.3, a voltage-gated potassium channel (KCNA3) to the proximal short arm of human chromosome 1 10.1006/geno.1994.1500 unknown Unknown 3738 KCNAB3 KCNA3B; Subunit 3; AKR6A9 potassium voltage-gated channel subfamily A regulatory beta subunit 3 KCNAB3 has potential as a highly informative and specific age biomarker for childhood and adolescence. others Homo sapiens Tracking age-correlated DNA methylation markers in the young 10.1016/j.fsigen.2018.06.011 unknown Unknown 9196 KL HFTC3 klotho KL may have weak glycosidase activity towards glucuronylated steroids. others Homo sapiens The KL-VS Polymorphism of KLOTHO Gene Is Protective Against Retinopathy Incidence in Patients With Type 1 Diabetes 10.1016/j.bbadis.2017.12.015 hsa04211 Longevity regulating pathway 9365 KRAS C-Ki-Ras GTPase Kras Ras proteins bind GDP/GTP and possess intrinsic GTPase activity. It plays an important role in the regulation of cell proliferation.It plays a role in promoting oncogenic events by inducing transcriptional silencing of tumor suppressor genes (TSGs) in colorectal cancer (CRC) cells in a ZNF304-dependent manner. others Homo sapiens Regulation of RAS oncogenicity by acetylation. 10.1073/pnas.1201487109 hsa04211 Longevity regulating pathway 8471 LEP OBS; OB leptin LEP is secreted from adipose tissues and is involved in food intake and energy expenditure. deregulated nutrient sensing Homo sapiens Early Onset of Reproductive Function in Normal Female Mice Treated With Leptin 10.1126/science.275.5296.88 hsa04630 JAK-STAT signaling pathway 3952 LEPR OBR; CD295 leptin receptor Deletion of LEPR in neurons of mice results in obesity. deregulated nutrient sensing Homo sapiens A Single Nucleotide Polymorphism (SNP) in the Leptin Receptor Is Associated With BMI, Fat Mass and Leptin Levels in Postmenopausal Caucasian Women 10.1007/s004390100468 hsa04630 JAK-STAT signaling pathway 3953 LMNA CMT2B1; CDCD1 lamin A/C Lamins are components of the nuclear lamina, a fibrous layer on the nucleoplasmic side of the inner nuclear membrane, which is thought to provide a framework for the nuclear envelope and may also interact with chromatin. genomic instability Homo sapiens Differential Stem Cell Aging Kinetics in Hutchinson-Gilford Progeria Syndrome and Werner Syndrome 10.1007/s13238-018-0517-8 hsa04210 Apoptosis 4000 LMNB1 LMN2; ADLD lamin B1 Lamins are components of the nuclear lamina, a fibrous layer on the nucleoplasmic side of the inner nuclear membrane, which is thought to provide a framework for the nuclear envelope and may also interact with chromatin. cellular senescence Homo sapiens The nuclear lamina comes of age 10.1038/nrm1550 hsa04210 Apoptosis 4001 LRP2 gp330; DBS low density lipoprotein receptor-related protein 2 LRP2 may also help regulate the release of parathyroid hormone. deregulated nutrient sensing Homo sapiens Cloning and Sequencing of Human gp330, a Ca(2+)-binding Receptor With Potential Intracellular Signaling Properties 10.1111/j.1432-1033.1996.0132u.x unknown Unknown 4036 MAP3K14 HS; HSNIK; NIK mitogen-activated protein kinase kinase kinase 14 SNPs in MAP3K14 involved in the NF-κB signalling pathway influence bone mineral density, geometry and turnover in a population-based cohort of middle aged and elderly men. NF-κB related gene Homo sapiens Polymorphisms in genes involved in the NF-κB signalling pathway are associated with bone mineral density, geometry and turnover in men 10.1371/journal.pone.0028031 hsa04064 NF-kappa B signaling pathway 9020 MAP3K5 MAPKKK5; ASK1; MEKK5 mitogen-activated protein kinase kinase kinase 5 It is involved in stress response and apoptosis. cellular senescence Homo sapiens Induction of apoptosis by ASK1, a mammalian MAPKKK that activates SAPK/JNK and p38 signaling pathways 10.1126/science.275.5296.90 hsa04010 MAPK signaling pathway 4217 MAP3K7 CSCF; FMD2; MEKK7 mitogen-activated protein kinase kinase kinase 7 MAP3K7 is implicated in the cellular response to internal and external environmental changes, playing a crucial role in the inflammation processes that accompany aging. NF-κB related gene Homo sapiens MAP3K7 and GSTZ1 are associated with human longevity: a two-stage case-control study using a multilocus genotyping 10.1007/s11357-012-9416-8 hsa04064 NF-kappa B signaling pathway 6885 MAPK14 PRKM14; p38; Mxi2 mitogen-activated protein kinase 14 It plays an important role in the cascades of cellular responses. stem cell exhaustion Homo sapiens p38MAPK Controls Expression of Multiple Cell Cycle Inhibitors and Islet Proliferation With Advancing Age 10.1016/j.devcel.2009.05.009 hsa04218 Cellular senescence 1432 MAPK3 ERK1; p44mapk; p44erk1 mitogen-activated protein kinase 3 It is?involved in stress response signalling and maybe in cell cycle control. stem cell exhaustion Homo sapiens Influence of Aging and Calorie Restriction on MAPKs Activity in Rat Kidney 10.1016/s0531-5565(02)00082-7 hsa04910 Insulin signaling pathway 5595 MAPK8 JNK; JNK1; SAPK1 mitogen-activated protein kinase 8 MAPK8, also known as JNK1, encodes many transcripts and is an important player in stress response. Overexpression of JNK in roundworms also increases lifespan. deregulated nutrient sensing Homo sapiens JNK Extends Life Span and Limits Growth by Antagonizing Cellular and Organism-Wide Responses to Insulin Signaling 10.1016/j.cell.2005.02.030 hsa04910 Insulin signaling pathway 5599 MAPK9 JNK2; p54a; SAPK mitogen-activated protein kinase 9 Also called JNK2, MAPK9 encodes many transcripts and is an important player in stress response. Mice without MAPK8 and MAPK9 die at embryonic stages. stem cell exhaustion Homo sapiens JNK Regulates Lifespan in Caenorhabditis Elegans by Modulating Nuclear Translocation of Forkhead Transcription factor/DAF-16 10.1073/pnas.0500749102 hsa04910 Insulin signaling pathway 5601 MAPT MTBT1; tau; PPND microtubule-associated protein tau Promotes microtubule assembly and stability, and might be involved in the establishment and maintenance of neuronal polarity. loss of proteostasis Homo sapiens Role of Tau Protein in Both Physiological and Pathological Conditions 10.1152/physrev.00024.2003 hsa04010 MAPK signaling pathway 4137 MAX bHLHd4; bHLHd5; bHLHd6 MYC associated factor X A transcriptional regulator, MAX can act as pro- or anti-apoptotic. cellular senescence Homo sapiens Role of Mxi1 in Ageing Organ Systems and the Regulation of Normal and Neoplastic Growth 10.1038/31008 hsa04010 MAPK signaling pathway 4149 MDM2 HDM2; MGC5370 MDM2 proto-oncogene, E3 ubiquitin protein ligase MDM2 is an oncogene that inhibits?TP53. The MDM2 gene encodes multiple transcripts, many of which are tissue-specific. Disruption of MDM2 in mice resulted in increased?TP53-dependent apoptosis and defects in multiple haematopoietic lineages. cellular senescence Homo sapiens mdm2 Is Critical for Inhibition of p53 During Lymphopoiesis and the Response to Ionizing Irradiation 10.1128/mcb.23.2.462-473.2003 hsa04115 p53 signaling pathway 4193 MED1 PBP; TRAP220; RB18A mediator complex subunit 1 MED1 is involved in embryonic development and important for?SP1?activity. stem cell exhaustion Homo sapiens Roles of PPARs in Health and Disease 10.1038/35013000 unknown Unknown 5469 MIF L-Dopachrome Tautomerase macrophage migration inhibitory factor (glycosylation-inhibiting factor) Pro-inflammatory cytokine. It is involved in the innate immune response to bacterial pathogens. The expression of MIF at sites of inflammation suggests a role as mediator in regulating the function of macrophages in host defense. It counteracts the anti-inflammatory activity of glucocorticoids. It has phenylpyruvate tautomerase and dopachrome tautomerase activity (in vitro), but the physiological substrate is not known. others Homo sapiens A polymorphism in the macrophage migration inhibitory factor gene is involved in the genetic predisposition of Crohn's disease and associated with cumulative steroid doses PMID: 17591062 unknown Unknown 4282 MLH1 DNA Mismatch Repair Protein Mlh1 mutL homolog 1 Heterodimerizes with PMS2 to form MutL alpha, a component of the post-replicative DNA mismatch repair system (MMR). DNA repair is initiated by MutS alpha (MSH2-MSH6) or MutS beta (MSH2-MSH3) binding to a dsDNA mismatch, then MutL alpha is recruited to the heteroduplex. Assembly of the MutL-MutS-heteroduplex ternary complex in presence of RFC and PCNA is sufficient to activate endonuclease activity of PMS2. It introduces single-strand breaks near the mismatch and thus generates new entry points for the exonuclease EXO1 to degrade the strand containing the mismatch. genomic instability Homo sapiens Human MutL homolog (MLH1) function in DNA mismatch repair: a prospective screen for missense mutations in the ATPase domain https://doi.org/10.1093/nar/gkh855 unknown Unknown 4292 MMP1 CLG; CLGN matrix metallopeptidase 1 Its expression level in skin fibroblasts was altered in the process of aging, and the cell growth rate was reduced. senescence-associated secretory phenotype Homo sapiens The effect of aging in primary human dermal fibroblasts 10.1371/journal.pone.0219165 hsa04657 IL-17 signaling pathway 4312 MMP10 STMY2 Matrix Metallopeptidase 10 Can degrade fibronectin, gelatins of type I, III, IV, and V; weakly collagens III, IV, and V. Activates procollagenase. senescence-associated secretory phenotype Homo sapiens Exome-wide rare variant analysis in familial essential tremor 10.1016/j.parkreldis.2020.11.021 unknown Unknown 4319 MMP12 HME Matrix Metallopeptidase 12 May be involved in tissue injury and remodeling. Has significant elastolytic activity. Can accept large and small amino acids at the P1' site, but has a preference for leucine. Aromatic or hydrophobic residues are preferred at the P1 site, with small hydrophobic residues (preferably alanine) occupying P3. senescence-associated secretory phenotype Homo sapiens A standardized Terminalia chebula fruit extract alters the expression of genes associated with skin architecture and barrier formation 10.1684/ejd.2020.3882 unknown Unknown 4321 MMP13 Collagenase 3 Matrix Metallopeptidase 13 Plays a role in the degradation of extracellular matrix proteins including fibrillar collagen, fibronectin, TNC and ACAN. Cleaves triple helical collagens, including type I, type II and type III collagen, but has the highest activity with soluble type II collagen. Can also degrade collagen type IV, type XIV and type X. May also function by activating or degrading key regulatory proteins, such as TGFB1 and CCN2. Plays a role in wound healing, tissue remodeling, cartilage degradation, bone development, bone mineralization and ossification. Required for normal embryonic bone development and ossification. Plays a role in the healing of bone fractures via endochondral ossification. Plays a role in wound healing, probably by a mechanism that involves proteolytic activation of TGFB1 and degradation of CCN2. Plays a role in keratinocyte migration during wound healing. May play a role in cell migration and in tumor cell invasion. senescence-associated secretory phenotype Homo sapiens Cosmeceutical potentials of Curcuma mangga Val. extract in human BJ fibroblasts against MMP1, MMP3, and MMP13 10.1016/j.heliyon.2020.e04921 hsa04657 IL-17 signaling pathway 4322 MMP14 MT1-MMP Matrix Metallopeptidase 14 Endopeptidase that degrades various components of the extracellular matrix such as collagen. Activates progelatinase A. Essential for pericellular collagenolysis and modeling of skeletal and extraskeletal connective tissues during development (By similarity). May be involved in actin cytoskeleton reorganization by cleaving PTK7 (PubMed:20837484). Acts as a positive regulator of cell growth and migration via activation of MMP15. Involved in the formation of the fibrovascular tissues in association with pro-MMP2 (PubMed:12714657). Cleaves ADGRB1 to release vasculostatin-40 which inhibits angiogenesis. senescence-associated secretory phenotype Homo sapiens Identification of a new pseudogenes/lncRNAs-hsa-miR-26b-5p-COL12A1 competing endogenous RNA network associated with prognosis of pancreatic cancer using bioinformatics analysis 10.18632/aging.103709 hsa04668 TNF signaling pathway 4323 MMP2 TBE-1 Matrix Metallopeptidase 2 Ubiquitinous metalloproteinase that is involved in diverse functions such as remodeling of the vasculature, angiogenesis, tissue repair, tumor invasion, inflammation, and atherosclerotic plaque rupture. As well as degrading extracellular matrix proteins, can also act on several nonmatrix proteins such as big endothelial 1 and beta-type CGRP promoting vasoconstriction. Also cleaves KISS at a Gly-|-Leu bond. Appears to have a role in myocardial cell death pathways. Contributes to myocardial oxidative stress by regulating the activity of GSK3beta. Cleaves GSK3beta in vitro. Involved in the formation of the fibrovascular tissues in association with MMP14. senescence-associated secretory phenotype Homo sapiens Galectin-1 promotes vasculogenic mimicry in gastric adenocarcinoma via the Hedgehog/GLI signaling pathway 10.18632/aging.104000 hsa01522 Endocrine resistance 4313 MMP3 Stromelysin-1 Matrix Metallopeptidase 3 Can degrade fibronectin, laminin, gelatins of type I, III, IV, and V; collagens III, IV, X, and IX, and cartilage proteoglycans. Activates procollagenase. senescence-associated secretory phenotype Homo sapiens The effect of aging in primary human dermal fibroblasts 10.1371/journal.pone.0219165 hsa04657 IL-17 signaling pathway 4314 MMP7 Pump-1 Protease Matrix Metallopeptidase 7 Degrades casein, gelatins of types I, III, IV, and V, and fibronectin. Activates procollagenase. senescence-associated secretory phenotype Homo sapiens Interleukin-17 promotes prostate cancer via MMP7-induced epithelial-to-mesenchymal transition 10.1038/onc.2016.240 hsa04310 Wnt signaling pathway 4316 MSRA Methionine Sulfoxide Reductase A; PMSR; Peptide Met(O) Reductase methionine sulfoxide reductase A A decline in MSRA activity could reduce the antioxidant defenses and increase the oxidation of critical proteins in neurons in the brain in AD. others Homo sapiens Decrease in Peptide Methionine Sulfoxide Reductase in Alzheimer's Disease Brain 10.1046/j.1471-4159.1999.0731660.x unknown Unknown 4482 MT-CO1 COX1; COI; MTCO1 mitochondrially encoded cytochrome c oxidase I MT-CO1 catalyses the reduction of oxygen to water, inactivation of it contributes to """"immortality"""". mitochondrial dysfunction Homo sapiens Mitochondrial Group II Introns, Cytochrome C Oxidase, and Senescence in Podospora Anserina 10.1128/mcb.19.6.4093 unknown Unknown 4512 MT1E MT-IE metallothionein 1E Metallothioneins have a high content of cysteine residues that bind various heavy metals; these proteins are transcriptionally regulated by both heavy metals and glucocorticoids. others Homo sapiens Induction by zinc of specific metallothionein isoforms in human monocytes 10.1111/j.1432-1033.1994.tb18603.x unknown Unknown 4493 MTOR RAPT1; FLJ44809; FRAP mechanistic target of rapamycin (serine/threonine kinase) The MTOR kinase belongs to the target of rapamycin group of enzymes which regulate cellular growth and proliferation. In human cell cultures MTOR inhibition supresses the senescence associated secretory phenotype (SASP), which can disrupt tissues and contribute to age-related pathologies, including cancer. deregulated nutrient sensing Homo sapiens MTOR Regulates the Pro-Tumorigenic Senescence-Associated Secretory Phenotype by Promoting IL1A Translation 10.1038/ncb3195 hsa04211 Longevity regulating pathway 2475 MVK MK Mevalonate Kinase Catalyzes the phosphorylation of mevalonate to mevalonate 5-phosphate, a key step in isoprenoid and cholesterol biosynthesis. others Homo sapiens Allantoin, a Potential Metabolite That Promotes AMPK Phosphorylation and Suppresses Cholesterol Biosynthesis Via the Mevalonate Pathway and Bloch Pathway 10.1007/s12010-020-03265-2 hsa00900 Terpenoid backbone biosynthesis 4598 MXD1 MAD1; bHLHc58; MAD MAX dimerization protein 1 MXD1 is involved in apoptosis. It forms with?MAX?a transcriptional repressor and might antagonize?MYC?function. cellular senescence Homo sapiens X-ray structures of Myc-Max and Mad-Max recognizing DNA. Molecular bases of regulation by proto-oncogenic transcription factors 10.1016/s0092-8674(02)01284-9 unknown Unknown 4084 MXI1 MXD2; MAD2; MXI MAX interactor 1, dimerization protein Mxi1 is involved in the homeostasis of differentiated organ systems, acts as a tumour suppressor in vivo, and engages the Myc network in a functionally relevant manner. others Homo sapiens Mxi1, a protein that specifically interacts with Max to bind Myc-Max recognition sites 10.1016/0092-8674(93)90662-a unknown Unknown 4601 MYC C-Myc v-myc avian myelocytomatosis viral oncogene homolog Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. cellular senescence Homo sapiens Reduced c-Myc signaling triggers telomere-independent senescence by regulating Bmi-1 and p16(INK4a) 10.1073/pnas.0600069103 hsa04218 Cellular senescence 4609 MYD88 MYD88 Innate Immune Signal Transduction Adaptor Myeloid Differentiation Primary Response 88 Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response (PubMed:15361868, PubMed:18292575). Acts via IRAK1, IRAK2, IRF7 and TRAF6, leading to NF-kappa-B activation, cytokine secretion and the inflammatory response (PubMed:15361868, PubMed:24316379, PubMed:19506249). Increases IL-8 transcription (PubMed:9013863). Involved in IL-18-mediated signaling pathway. Activates IRF1 resulting in its rapid migration into the nucleus to mediate an efficient induction of IFN-beta, NOS2/INOS, and IL12A genes. MyD88-mediated signaling in intestinal epithelial cells is crucial for maintenance of gut homeostasis and controls the expression of the antimicrobial lectin REG3G in the small intestine (By similarity). others Homo sapiens Aging leads to dysfunctional innate immune responses to TLR2 and TLR4 agonists 10.1007/s40520-018-1064-0 hsa04010 MAPK signaling pathway 4615 MYLK MLCK1 Myosin Light Chain Kinase Calcium/calmodulin-dependent myosin light chain kinase implicated in smooth muscle contraction via phosphorylation of myosin light chains (MLC). Also regulates actin-myosin interaction through a non-kinase activity. Phosphorylates PTK2B/PYK2 and myosin light-chains. Involved in the inflammatory response (e.g. apoptosis, vascular permeability, leukocyte diapedesis), cell motility and morphology, airway hyperreactivity and other activities relevant to asthma. Required for tonic airway smooth muscle contraction that is necessary for physiological and asthmatic airway resistance. Necessary for gastrointestinal motility. others Homo sapiens Heterozygote genotypes at rs2222823 and rs2811712 SNP loci are associated with cerebral small vessel disease in Han Chinese population 10.1111/j.1755-5949.2012.00322.x hsa04020 Calcium signaling pathway 4638 NBN NBS1; P95 nibrin Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. genomic instability Homo sapiens Nijmegen Breakage Syndrome Fibroblasts and iPSCs: Cellular Models for Uncovering Disease-Associated Signaling Pathways and Establishing a Screening Platform for Anti-Oxidants 10.1038/s41598-017-07905-2 hsa04218 Cellular senescence 4683 NCOR1 TRAC1 nuclear receptor corepressor 1 NCOR1 mediates transcriptional repression by certain nuclear receptors. It promotes histone deacetylation and the formation of repressive chromatin structures which may impede the access of basal transcription factors. cellular senescence Homo sapiens Exchange of N-CoR corepressor and Tip60 coactivator complexes links gene expression by NF-kappaB and beta-amyloid precursor protein 10.1016/s0092-8674(02)00809-7 unknown Unknown 9611 NCOR2 Thyroid-, Retinoic-Acid-Receptor-Associated Corepressor nuclear receptor corepressor 2 It mediates the transcriptional repression activity of some nuclear receptors by promoting chromatin condensation, thus preventing access of the basal transcription. Isoform 1 and isoform 4 have different affinities for different nuclear receptors. It is involved in the regulation BCL6-dependent of the germinal center (GC) reactions, mainly through the control of the GC B-cells proliferation and survival. others Homo sapiens A hybrid mechanism of action for BCL6 in B cells defined by formation of functionally distinct complexes at enhancers and promoters 10.1016/j.celrep.2013.06.016 hsa04330 Notch signaling pathway 9612 NFE2L1 Locus Control Region-Factor 1 nuclear factor, erythroid 2-like 1 NFE2L1 constitutes a precursor of the transcription factor NRF1. It is able to detect various cellular stresses, such as cholesterol excess, oxidative stress or proteasome inhibition. In response to stress, it is released from the endoplasmic reticulum membrane following cleavage by the protease DDI2 and translocates into the nucleus to form the transcription factor NRF1. deregulated nutrient sensing Homo sapiens Proteasomal Degradation Is Transcriptionally Controlled by TCF11 via an ERAD-dependent Feedback Loop 10.1016/j.molcel.2010.09.012 unknown Unknown 4779 NFE2L2 NF-E2-Related Factor 2 nuclear factor, erythroid 2-like 2 NFE2L2 is a ranscription factor that plays a key role in the response to oxidative stress: binds to antioxidant response (ARE) elements present in the promoter region of many cytoprotective genes, such as phase 2 detoxifying enzymes, and promotes their expression, thereby neutralizing reactive electrophiles. In normal conditions, ubiquitinated and degraded in the cytoplasm by the BCR(KEAP1) complex.The NFE2L2/NRF2 pathway is also activated in response to selective autophagy: autophagy promotes interaction between KEAP1 and SQSTM1/p62 and subsequent inactivation of the BCR(KEAP1) complex, leading to NFE2L2/NRF2 nuclear accumulation and expression of cytoprotective genes. genomic instability Homo sapiens p62/SQSTM1 Is a Target Gene for Transcription Factor NRF2 and Creates a Positive Feedback Loop by Inducing Antioxidant Response Element-Driven Gene Transcription 10.1074/jbc.M110.118976 unknown Unknown 4780 NFKB1 KBF1; p105; NFKB-p50 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 Chronic, progressive low-grade inflammation induced by knockout of the nfkb1 subunit of the transcription factor NF-κB induces premature ageing. altered intercellular communication Homo sapiens Growing old with nuclear factor-kappaB 10.1379/1466-1268(2002)007<0207:gownfb>2.0.co;2 hsa04211 Longevity regulating pathway 4790 NFKB2 P52; LYT10 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) NF-kappa-B is a pleiotropic transcription factor present in almost all cell types and is the endpoint of a series of signal transduction events that are initiated by a vast array of stimuli related to many biological processes such as inflammation, immunity, differentiation, cell growth, tumorigenesis and apoptosis. others Homo sapiens NF-kB2 Induces Senescence Bypass in Melanoma via a Direct Transcriptional Activation of EZH2 10.1038/onc.2015.331 hsa04010 MAPK signaling pathway 4791 NFKBIA IKBA; MAD-3; IkappaBalpha nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha NFKBIA may be involved in inflammation, apoptosis, differentiation, and growth. deregulated nutrient sensing Homo sapiens Integrated genomic approaches identify major pathways and upstream regulators in late onset Alzheimer's disease 10.1038/srep12393 hsa04064 NF-kappa B signaling pathway 4792 NGF HSAN5 nerve growth factor (beta polypeptide) Nerve growth factor is important for the development and maintenance of the sympathetic and sensory nervous systems. cellular senescence Homo sapiens Innovative Therapy for Alzheimer's Disease-With Focus on Biodelivery of NGF 10.3389/fnins.2019.00038 hsa04010 MAPK signaling pathway 4803 NGFR TNFRSF16; P75 nerve growth factor receptor Low affinity receptor which can bind to NGF, BDNF, NTF3, and NTF4. Forms a heterodimeric receptor with SORCS2 that binds the precursor forms of NGF, BDNF and NTF3 with high affinity, and has much lower affinity for mature NGF and BDNF. Plays an important role in differentiation and survival of specific neuronal populations during development. cellular senescence Homo sapiens Validation of a priori candidate Alzheimer's disease SNPs with brain amyloid-beta deposition 10.1038/s41598-019-53604-5 hsa04010 MAPK signaling pathway 4804 NLRP3 AGTAVPRL; AII; AVP NLR family pyrin domain containing 3 Several AMPK-dependent pathways regulate NLRP3 inflammasome activation during aging, suggesting NLRP3 as a potential pharmacological target in age-related diseases. deregulated nutrient sensing Homo sapiens AMP-Activated Protein Kinase Regulation of the NLRP3 Inflammasome during Aging 10.1016/j.tem.2017.10.009 unknown Unknown 114548 NOG SYNS1; SYM1 noggin NOG may be a factor in bone ageing. Essential for cartilage morphogenesis and joint formation. stem cell exhaustion Homo sapiens Impaired Osteoblastic Differentiation, Reduced Bone Formation, and Severe Osteoporosis in Noggin-Overexpressing Mice 10.1172/JCI15543 hsa04350 TGF-beta signaling pathway 9241 NR3C1 GCRST nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) Receptor for glucocorticoids. Has a dual mode of action: as a transcription factor that binds to glucocorticoid response elements (GRE), both for nuclear and mitochondrial DNA, and as a modulator of other transcription factors. others Homo sapiens Glucocorticoid receptor (NR3C1) gene polymorphisms are associated with age and blood parameters in Polish Caucasian nonagenarians and centenarians 10.1016/j.exger.2018.12.006 unknown Unknown 2908 NRAS Transforming Protein N-Ras GTPase Nras Ras proteins bind GDP/GTP and possess intrinsic GTPase activity. others Homo sapiens Pharmacological targeting of STK19 inhibits oncogenic NRAS-driven melanomagenesis 10.1016/j.cell.2019.01.002 hsa04211 Longevity regulating pathway 4893 NRG1 HRGA; SMDF neuregulin 1 It is a direct ligand for ERBB3 and ERBB4 tyrosine kinase receptors. It concomitantly recruits ERBB1 and ERBB2 coreceptors, resulting in ligand-stimulated tyrosine phosphorylation and activation of the ERBB receptors. cellular senescence Homo sapiens Therapeutic efficacy of neuregulin 1-expressing human adipose-derived mesenchymal stem cells for ischemic stroke 10.1371/journal.pone.0222587 unknown Unknown 3084 NUDT1 8-Oxo-DGTPase nudix (nucleoside diphosphate linked moiety X)-type motif 1 NUDT1 plays a redundant role in sanitizing oxidized nucleotide pools, such as 8-oxo-dGTP pools. It acts as a sanitizing enzyme for oxidized nucleotide pools, thus suppressing cell dysfunction and death induced by oxidative stress. It is able to hydrolyze also the corresponding ribonucleotides, 2-OH-ATP, 8-oxo-GTP and 8-oxo-ATP. genomic instability Homo sapiens The Oxidized Forms of dATP Are Substrates for the Human MutT Homologue, the hMTH1 Protein 10.1074/jbc.274.26.18201 unknown Unknown 4521 PAPPA Placenta-Specific 3 pregnancy-associated plasma protein A, pappalysin 1 PAPPA is a metalloproteinase which specifically cleaves insulin-like growth factor binding protein (IGFBP)-5 at the '163-Ser-|-Lys-164' bond. It shows limited proteolysis toward IGFBP-3. loss of proteostasis Homo sapiens Pregnancy-associated plasma protein-A2 (PAPP-A2), a novel insulin-like growth factor-binding protein-5 proteinase https://doi.org/10.1210/en.2011-0036 unknown Unknown 5069 PARP1 ADPRT poly (ADP-ribose) polymerase 1 PARP1 is poly-ADP-ribosyltransferase that mediates poly-ADP-ribosylation of proteins and plays a key role in DNA repair. genomic instability Homo sapiens Poly(ADP-ribose) polymerase-1, DNA repair and mammalian longevity 10.1016/s0531-5565(02)00144-4 hsa04064 NF-kappa B signaling pathway 142 PCK1 Phosphoenolpyruvate Carboxykinase; Cytosolic [GTP] phosphoenolpyruvate carboxykinase 1 (soluble) PCK1 regulates cataplerosis and anaplerosis, the processes that control the levels of metabolic intermediates in the citric acid cycle. At low glucose levels, it catalyzes the cataplerotic conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle. At high glucose levels, it catalyzes the anaplerotic conversion of phosphoenolpyruvate to oxaloacetate. others Homo sapiens Dynamic acetylation of phosphoenolpyruvate carboxykinase toggles enzyme activity between gluconeogenic and anaplerotic reactions https://doi.org/10.1016/j.molcel.2018.07.031 hsa04910 Insulin signaling pathway 5105 PCMT1 PIMT; Epididymis Secretory Sperm Binding Protein protein-L-isoaspartate (D-aspartate) O-methyltransferase It plays a role in the repair and/or degradation of damaged proteins, promote aging. loss of proteostasis Homo sapiens Improved Rotorod Performance and Hyperactivity in Deficient in a Protein Repair Methyltransferase 10.1016/j.bbr.2003.11.007 unknown Unknown 5110 PCNA Proliferating Cell Nuclear Antigen; Cyclin; ATLD2 proliferating cell nuclear antigen PCNA is an important player in DNA replication and, probably, in DNA repair, and it interacts with WRN. genomic instability Homo sapiens Hypomorphic PCNA mutation underlies a human DNA repair disorder 10.1172/JCI74593 hsa04110 Cell cycle 5111 PDGFB PDGF2; SIS platelet-derived growth factor beta polypeptide It is a growth factor that plays an essential role in the regulation of embryonic development, cell proliferation, cell migration, survival and chemotaxis. cellular senescence Homo sapiens Platelet-derived Growth Factor B Induces Senescence and Transformation in Normal Human Fibroblasts 10.18632/aging.100577 hsa04010 MAPK signaling pathway 5155 PDGFRA Platelet-Derived Growth Factor Receptor Alpha platelet-derived growth factor receptor, alpha polypeptide Tyrosine-protein kinase that acts as a cell-surface receptor for PDGFA, PDGFB and PDGFC and plays an essential role in the regulation of embryonic development, cell proliferation, survival and chemotaxis. Depending on the context, promotes or inhibits cell proliferation and cell migration. It plays an important role in the differentiation of bone marrow-derived mesenchymal stem cells. It is required for normal skeleton development and cephalic closure during embryonic development. Required for normal development of the mucosa lining the gastrointestinal tract, and for recruitment of mesenchymal cells and normal development of intestinal villi. altered intercellular communication Homo sapiens Independent expression of human alpha or beta platelet-derived growth factor receptor cDNAs in a naive hematopoietic cell leads to functional coupling with mitogenic and chemotactic signaling pathways 10.1073/pnas.86.21.8314 hsa04010 MAPK signaling pathway 5156 PDGFRB CD140B platelet-derived growth factor receptor, beta polypeptide PDGFRB is a tyrosine-protein kinase that acts as cell-surface receptor for homodimeric PDGFB and PDGFD and for heterodimers formed by PDGFA and PDGFB, and plays an essential role in the regulation of embryonic development, cell proliferation, survival, differentiation, chemotaxis and migration. others Homo sapiens Premature Aging Syndrome, Penttinen Type: Report of a Chinese Case With a PDGFRB Mutation 10.2340/00015555-2993 hsa04010 MAPK signaling pathway 5159 PDPK1 PDK1 3-phosphoinositide dependent protein kinase 1 PDK1 functions as a master kinase, phosphorylating and activating PKB/Akt, S6K and RSK. PDK1 is essential for embryonic development, and regulates cell size independently of cell number or proliferation, as well as insulin's ability to activate PKB, S6K and RSK. others Homo sapiens PPARβ/δ promotes HRAS-induced senescence and tumor suppression by potentiating p-ERK and repressing p-AKT signaling 10.1038/onc.2013.477 hsa04910 Insulin signaling pathway 5170 PECAM1 CD31 Antigen Platelet And Endothelial Cell Adhesion Molecule 1 Cell adhesion molecule which is required for leukocyte transendothelial migration (TEM) under most inflammatory conditions (PubMed:19342684, PubMed:17580308). Tyr-690 plays a critical role in TEM and is required for efficient trafficking of PECAM1 to and from the lateral border recycling compartment (LBRC) and is also essential for the LBRC membrane to be targeted around migrating leukocytes (PubMed:19342684). Trans-homophilic interaction may play a role in endothelial cell-cell adhesion via cell junctions (PubMed:27958302). Heterophilic interaction with CD177 plays a role in transendothelial migration of neutrophils (PubMed:17580308). Homophilic ligation of PECAM1 prevents macrophage-mediated phagocytosis of neighboring viable leukocytes by transmitting a detachment signal (PubMed:12110892). Promotes macrophage-mediated phagocytosis of apoptotic leukocytes by tethering them to the phagocytic cells; PECAM1-mediated detachment signal appears to be disabled in apoptotic leukocytes (PubMed:12110892). Modulates bradykinin receptor BDKRB2 activation (PubMed:18672896). Regulates bradykinin- and hyperosmotic shock-induced ERK1/2 activation in endothelial cells (PubMed:18672896). Induces susceptibility to atherosclerosis (By similarity). senescence-associated secretory phenotype Homo sapiens SIRT7 deficiency suppresses inflammation, induces EndoMT, and increases vascular permeability in primary pulmonary endothelial cells 10.1038/s41598-020-69236-z hsa04514 Cell adhesion molecules 5175 PEX5 Peroxisomal Targeting Signal 1 Receptor PEX5-related protein PEX5 is an accessory subunit of hyperpolarization-activated cyclic nucleotide-gated (HCN) channels, regulating their cell-surface expression and cyclic nucleotide dependence. others Homo sapiens Peroxisomal targeting signal-1 recognition by the TPR domains of human PEX5 10.1038/81930 unknown Unknown 5830 PIAS4 PIASY Protein Inhibitor Of Activated STAT 4 Functions as an E3-type small ubiquitin-like modifier (SUMO) ligase, stabilizing the interaction between UBE2I and the substrate, and as a SUMO-tethering factor. Plays a crucial role as a transcriptional coregulation in various cellular pathways, including the STAT pathway, the p53/TP53 pathway, the Wnt pathway and the steroid hormone signaling pathway. Involved in gene silencing. Mediates sumoylation of CEBPA, PARK7, HERC2, MYB, TCF4 and RNF168. In Wnt signaling, represses LEF1 and enhances TCF4 transcriptional activities through promoting their sumoylations. Enhances the sumoylation of MTA1 and may participate in its paralog-selective sumoylation. NF-κB related gene Homo sapiens Regulation of Stress-Inducible Phosphoprotein 1 Nuclear Retention by Protein Inhibitor of Activated STAT PIAS1 10.1074/mcp.M113.031005 hsa04064 NF-kappa B signaling pathway 51588 PIDD1 LRDD P53-Induced Death Domain Protein 1 Component of the DNA damage/stress response pathway that functions downstream of p53/TP53 and can either promote cell survival or apoptosis (PubMed:10973264, PubMed:15073321, PubMed:16360037, PubMed:17159900). Associated with CRADD and the CASP2 caspase, it forms the PIDDosome a complex that activates CASP2 and triggers apoptosis (PubMed:15073321, PubMed:17159900). Associated with IKBKG and RIPK1, it enhances sumoylation and ubiquitination of IKBKG which is important for activation of the transcription factor NF-kappa-B (PubMed:16360037, PubMed:17159900). NF-κB related gene Homo sapiens The PIDDosome activates p53 in response to supernumerary centrosomes 10.1101/gad.289728.116 hsa04064 NF-kappa B signaling pathway 55367 PIGF GPI11 Homolog Phosphatidylinositol Glycan Anchor Biosynthesis Class F Involved in GPI-anchor biosynthesis through the transfer of ethanolamine phosphate to the third mannose of GPI. others Homo sapiens Hierarchical Clustering Analyses of Plasma Proteins in Subjects With Cardiovascular Risk Factors Identify Informative Subsets Based on Differential Levels of Angiogenic and Inflammatory Biomarkers 10.3389/fnins.2020.00084 hsa00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 5281 PIK3CA Serine/Threonine Protein Kinase PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha Phosphoinositide-3-kinase (PI3K) that phosphorylates PtdIns (Phosphatidylinositol), PtdIns4P (Phosphatidylinositol 4-phosphate) and PtdIns(4,5)P2 (Phosphatidylinositol 4,5-bisphosphate) to generate phosphatidylinositol 3,4,5-trisphosphate (PIP3). PIP3 plays a key role by recruiting PH domain-containing proteins to the membrane, including AKT1 and PDPK1, activating signaling cascades involved in cell growth, survival, proliferation, motility and morphology. It participates in cellular signaling in response to various growth factors. It is involved in the activation of AKT1 upon stimulation by receptor tyrosine kinases ligands such as EGF, insulin, IGF1, VEGFA and PDGF. altered intercellular communication Homo sapiens Phosphoinositide 3-kinase signaling pathway mediated by p110{alpha} regulates invadopodia formation 10.1083/jcb.201009126 hsa04211 Longevity regulating pathway 5290 PIK3CB PIK3C1 phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta PIK3CB is a phosphoinositide-3-kinase (PI3K) that phosphorylates PtdIns (Phosphatidylinositol), PtdIns4P (Phosphatidylinositol 4-phosphate) and PtdIns(4,5)P2 (Phosphatidylinositol 4,5-bisphosphate) to generate phosphatidylinositol 3,4,5-trisphosphate (PIP3). PIP3 plays a key role by recruiting PH domain-containing proteins to the membrane, including AKT1 and PDPK1, activating signaling cascades involved in cell growth, survival, proliferation, motility and morphology. cellular senescence Homo sapiens Coordinated Expression of Phosphoinositide Metabolic Genes During Development and Aging of Human Dorsolateral Prefrontal Cortex 10.1371/journal.pone.0132675 hsa04211 Longevity regulating pathway 5291 PIK3CD Phosphoinositide-3-Kinase C Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform Phosphoinositide-3-kinase (PI3K) that phosphorylates PtdIns(4,5)P2 (Phosphatidylinositol 4,5-bisphosphate) to generate phosphatidylinositol 3,4,5-trisphosphate (PIP3). PIP3 plays a key role by recruiting PH domain-containing proteins to the membrane, including AKT1 and PDPK1, activating signaling cascades involved in cell growth, survival, proliferation, motility and morphology. Mediates immune responses. It plays a role in B-cell development, proliferation, migration, and function. It is required for B-cell receptor (BCR) signaling. altered intercellular communication Homo sapiens p37delta is a new isoform of PI3K p110delta that increases cell proliferation and is overexpressed in tumors 10.1038/onc.2011.492 hsa04211 Longevity regulating pathway 5293 PIK3R1 GRB1; p85-ALPHA; p85 phosphoinositide-3-kinase, regulatory subunit 1 (alpha) Together with?PIK3CB, PIK3R1 is involved in insulin (INS) signalling and energy metabolism. mitochondrial dysfunction Homo sapiens CircRNA AFF4 promotes osteoblast cells proliferation and inhibits apoptosis via the Mir-7223-5p/PIK3R1 axis 10.18632/aging.102524 hsa04211 Longevity regulating pathway 5295 PIK3R2 PtdIns-3-Kinase Regulatory Subunit P85-Beta Phosphatidylinositol 3-kinase regulatory subunit beta Regulatory subunit of phosphoinositide-3-kinase (PI3K), a kinase that phosphorylates PtdIns(4,5)P2 (Phosphatidylinositol 4,5-bisphosphate) to generate phosphatidylinositol 3,4,5-trisphosphate (PIP3). PIP3 plays a key role by recruiting PH domain-containing proteins to the membrane, including AKT1 and PDPK1, activating signaling cascades involved in cell growth, survival, proliferation, motility and morphology. Binds to activated (phosphorylated) protein-tyrosine kinases, through its SH2 domain, and acts as an adapter, mediating the association of the p110 catalytic unit to the plasma membrane. Indirectly regulates autophagy. Promotes nuclear translocation of XBP1 isoform 2 in a ER stress- and/or insulin-dependent manner during metabolic overloading in the liver and hence plays a role in glucose tolerance improvement. altered intercellular communication Homo sapiens FBXL2- and PTPL1-mediated degradation of p110-free p85beta regulatory subunit controls the PI(3)K signalling cascade 10.1038/ncb2731 hsa04211 Longevity regulating pathway 5296 PIK3R3 PtdIns-3-Kinase Regulatory Subunit P55-Gamma Phosphatidylinositol 3-kinase regulatory subunit gamma PIK3R3 binds to activated (phosphorylated) protein-tyrosine kinases through its SH2 domain and regulates their kinase activity. During insulin stimulation, it also binds to IRS-1. altered intercellular communication Homo sapiens Cloning of human p55 gamma, a regulatory subunit of phosphatidylinositol 3-kinase, by a yeast two-hybrid library screen with the insulin-like growth factor-I receptor 10.1016/s0378-1119(98)00045-6 hsa04211 Longevity regulating pathway 8503 PIN1 UBL5; DOD peptidylprolyl cis/trans isomerase, NIMA-interacting 1 Peptidyl-prolyl cis/trans isomerase (PPIase) binds to and isomerizes specific phosphorylated Ser/Thr-Pro (pSer/Thr-Pro) motifs. By inducing conformational changes in a subset of phosphorylated proteins, it acts as a molecular switch in multiple cellular processes. cellular senescence Homo sapiens The Role of Pin1 Protein in Aging of Human Tendon stem/progenitor Cells 10.1016/j.bbrc.2015.06.163 unknown Unknown 5300 PLAU UPA; ATF plasminogen activator, urokinase PLAU specifically cleaves the zymogen plasminogen to form the active enzyme plasmin. others Homo sapiens Functional Networks of Aging Markers in the Glomeruli of IgA Nephropathy: A New Therapeutic Opportunity 10.18632/oncotarget.9033 hsa04064 NF-kappa B signaling pathway 5328 PLAUR UPAR Plasminogen Activator, Urokinase Receptor Acts as a receptor for urokinase plasminogen activator. Plays a role in localizing and promoting plasmin formation. Mediates the proteolysis-independent signal transduction activation effects of U-PA. It is subject to negative-feedback regulation by U-PA which cleaves it into an inactive form. others Homo sapiens Urokinase-type plasminogen activator receptor is associated with the development of adipose tissue 10.1160/TH10-02-0101 hsa04610 Complement and coagulation cascades 5329 PLCG1 PLC-Gamma-1 Phospholipase C Gamma 1 Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades. Becomes activated in response to ligand-mediated activation of receptor-type tyrosine kinases, such as PDGFRA, PDGFRB, FGFR1, FGFR2, FGFR3 and FGFR4. Plays a role in actin reorganization and cell migration. NF-κB related gene Homo sapiens Forebrain-specific ablation of phospholipase Cγ1 causes manic-like behavior 10.1038/mp.2016.261 hsa04064 NF-kappa B signaling pathway 5335 PLCG2 APLAID; FCAS phospholipase C, gamma 2 (phosphatidylinositol-specific) The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. It is a crucial enzyme in transmembrane signaling. others Homo sapiens Correction To: A Nonsynonymous Mutation in PLCG2 Reduces the Risk of Alzheimer's Disease, Dementia With Lewy Bodies and Frontotemporal Dementia, and Increases the Likelihood of Longevity 10.1007/s00401-019-02107-8 hsa04935 Growth hormone synthesis, secretion and action 5336 PMCH Pro-MCH pro-melanin-concentrating hormone MCH may act as a neurotransmitter or neuromodulator in a broad array of neuronal functions directed toward the regulation of goal-directed behavior, such as food intake, and general arousal. May also have a role in spermatocyte differentiation. others Homo sapiens Melanin-concentrating hormone functions in the nervous system: food intake and stress https://doi.org/10.1517/14728222.7.4.495 unknown Unknown 5367 PML MYL; TRIM19; RNF71 promyelocytic leukemia PML also appears to control cell proliferation and cellular senescence. PML IV-induced senescence involves stabilization and activation of p53. cellular senescence Homo sapiens Deconstructing PML-induced Premature Senescence 10.1093/emboj/cdf341 unknown Unknown 5371 POLA1 p180; POLA; NSX polymerase (DNA directed), alpha 1, catalytic subunit POLA1 is involved in DNA replication. genomic instability Homo sapiens Age-related Changes in the Induction of DNA Polymerases in Rat Liver by Gamma-Ray Irradiation 10.1016/s0047-6374(02)00119-7 unknown Unknown 5422 POLB DNA Polymerase Beta Subunit; DNA Pol Beta polymerase (DNA directed), beta POLB is a repair polymerase that plays a key role in base-excision repair. Has 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity that removes the 5' sugar phosphate and also acts as a DNA polymerase that adds one nucleotide to the 3' end of the arising single-nucleotide gap. Conducts 'gap-filling' DNA synthesis in a stepwise distributive fashion rather than in a processive fashion as for other DNA polymerases. genomic instability Homo sapiens Structure and Mechanism of DNA Polymerase β 10.1021/bi500139h unknown Unknown 5423 POLD1 CDC2; POLD polymerase (DNA directed), delta 1, catalytic subunit POLD1 is mostly involved in DNA synthesis. genomic instability Homo sapiens Interactions Between the Werner Syndrome Helicase and DNA Polymerase Delta Specifically Facilitate Copying of Tetraplex and Hairpin Structures of the d(CGG)n Trinucleotide Repeat Sequence 10.1074/jbc.M100253200 unknown Unknown 5424 POLG MDP1; PEO polymerase (DNA directed), gamma POLG is involved in the replication of mitochondrial DNA. It associates with mitochondrial DNA. mitochondrial dysfunction Homo sapiens DNA polymerase gamma in mitochondrial DNA replication and repair 10.1100/tsw.2003.09 unknown Unknown 5428 PON1 ESA; PON paraoxonase 1 PON1 hydrolyzes toxic compounds and is associated with neurodegenerative diseases. others Homo sapiens Genetic Polymorphism of Paraoxonase 1 (PON1) and Susceptibility to Parkinson's Disease 10.1016/s0006-8993(98)00586-1 unknown Unknown 5444 POU1F1 PIT1; GHF1 POU class 1 homeobox 1 POU1F1 is a transcription factor involved in the specification of the lactotrope, somatotrope, and thyrotrope phenotypes in the developing anterior pituitary. loss of proteostasis Homo sapiens PIT1 abnormality 10.1016/s1096-6374(99)80076-8 hsa04935 Growth hormone synthesis, secretion and action 5449 PPARA NR1C1 peroxisome proliferator-activated receptor alpha PPARA is a ligand-activated transcription factor and a key regulator of lipid metabolism. others Homo sapiens Roles of PPARs in health and disease 10.1038/35013000 unknown Unknown 5465 PPARG Nuclear Receptor Subfamily 1 Group C Member 3 peroxisome proliferator-activated receptor gamma Once activated by a ligand, the nuclear receptor binds to DNA specific PPAR response elements (PPRE) and modulates the transcription of its target genes, such as acyl-CoA oxidase. It therefore controls the peroxisomal beta-oxidation pathway of fatty acids. It is a key regulator of adipocyte differentiation and glucose homeostasis. deregulated nutrient sensing Homo sapiens Mycobacterium tuberculosis 19-kDa lipoprotein induces Toll-like receptor 2-dependent peroxisome proliferator-activated receptor gamma expression and promotes inflammatory responses in human macrophages 10.3892/mmr.2014.3070 hsa04211 Longevity regulating pathway 5468 PPARGC1A PPARG Coactivator 1 Alpha peroxisome proliferator-activated receptor gamma, coactivator 1 alpha Transcriptional coactivator for steroid receptors and nuclear receptors. It greatly increases the transcriptional activity of PPARG and thyroid hormone receptor on the uncoupling protein promoter. It can regulate key mitochondrial genes that contribute to the program of adaptive thermogenesis. It plays an essential role in metabolic reprogramming in response to dietary availability through coordination of the expression of a wide array of genes involved in glucose and fatty acid metabolism. altered intercellular communication Homo sapiens A tissue-specific coactivator of steroid receptors, identified in a functional genetic screen 10.1128/mcb.20.7.2411-2422.2000 hsa04211 Longevity regulating pathway 10891 PPM1D Protein Phosphatase 1D Magnesium-Dependent; Delta Isoform protein phosphatase, Mg2+/Mn2+ dependent, 1D It is required for the relief of p53-dependent checkpoint mediated cell cycle arrest. It binds to and dephosphorylates 'Ser-15' of TP53 and 'Ser-345' of CHEK1 which contributes to the functional inactivation of these proteins. It is also an important regulator of global heterochromatin silencing and critical in maintaining genome integrity. genomic instability Homo sapiens PPM1D Dephosphorylates Chk1 and p53 and Abrogates Cell Cycle Checkpoints 10.1101/gad.1291305 hsa04115 p53 signaling pathway 8493 PPP1CA PP1A; PP-1A; PP1alpha protein phosphatase 1, catalytic subunit, alpha isozyme It is involved in different cellular processes including cell division, protein synthesis, and synaptic plasticity. loss of proteostasis Homo sapiens Protein Phosphatase 1 Is a Molecular Constraint on Learning and Memory 10.1038/nature00928 hsa04910 Insulin signaling pathway 5499 PRDX1 NKEFA; PAGA peroxiredoxin 1 Prdx1 is an important defence against oxidants in ageing mice. Prdx1-deficient fibroblasts show decreased proliferation and increased sensitivity to oxidative DNA damage. others Homo sapiens PRDX1 and MTH1 cooperate to prevent ROS-mediated inhibition of telomerase 10.1101/gad.313460.118 unknown Unknown 5052 PRKAA1 AMPK Subunit Alpha-1 5'-AMP-activated protein kinase catalytic subunit alpha-1 Catalytic subunit of AMP-activated protein kinase (AMPK), an energy sensor protein kinase that plays a key role in regulating cellular energy metabolism. In response to reduction of intracellular ATP levels, AMPK activates energy-producing pathways and inhibits energy-consuming processes: inhibits protein, carbohydrate and lipid biosynthesis, as well as cell growth and proliferation. AMPK acts via direct phosphorylation of metabolic enzymes, and by longer-term effects via phosphorylation of transcription regulators. deregulated nutrient sensing Homo sapiens The energy sensor AMP-activated protein kinase directly regulates the mammalian FOXO3 transcription factor 10.1074/jbc.M705325200 hsa04211 Longevity regulating pathway 5562 PRKAA2 AMPK Subunit Alpha-2 5'-AMP-activated protein kinase catalytic subunit alpha-2 Catalytic subunit of AMP-activated protein kinase (AMPK), an energy sensor protein kinase that plays a key role in regulating cellular energy metabolism. In response to reduction of intracellular ATP levels, AMPK activates energy-producing pathways and inhibits energy-consuming processes: inhibits protein, carbohydrate and lipid biosynthesis, as well as cell growth and proliferation. AMPK acts via direct phosphorylation of metabolic enzymes, and by longer-term effects via phosphorylation of transcription regulators. deregulated nutrient sensing Homo sapiens The energy sensor AMP-activated protein kinase directly regulates the mammalian FOXO4 transcription factor 10.1074/jbc.M705325201 hsa04211 Longevity regulating pathway 5563 PRKAB1 AMPK Subunit Beta-1 5'-AMP-activated protein kinase subunit beta-1 Non-catalytic subunit of AMP-activated protein kinase (AMPK), an energy sensor protein kinase that plays a key role in regulating cellular energy metabolism. In response to reduction of intracellular ATP levels, AMPK activates energy-producing pathways and inhibits energy-consuming processes: inhibits protein, carbohydrate and lipid biosynthesis, as well as cell growth and proliferation. AMPK acts via direct phosphorylation of metabolic enzymes, and by longer-term effects via phosphorylation of transcription regulators. others Homo sapiens Non-catalytic beta and gamma subunits isoforms of the AMP-activated protein kinase 10.1074/jbc.271.15.8675 hsa04211 Longevity regulating pathway 5564 PRKAB2 AMPK Subunit Beta-2 5'-AMP-activated protein kinase subunit beta-2 Non-catalytic subunit of AMP-activated protein kinase (AMPK), an energy sensor protein kinase that plays a key role in regulating cellular energy metabolism. In response to reduction of intracellular ATP levels, AMPK activates energy-producing pathways and inhibits energy-consuming processes: inhibits protein, carbohydrate and lipid biosynthesis, as well as cell growth and proliferation. AMPK acts via direct phosphorylation of metabolic enzymes, and by longer-term effects via phosphorylation of transcription regulators. others Homo sapiens Non-catalytic beta and gamma subunits isoforms of the AMP-activated protein kinase 10.1074/jbc.271.15.8676 hsa04211 Longevity regulating pathway 5565 PRKACA CAMP-Dependent Protein Kinase Catalytic Subunit Alpha cAMP-dependent protein kinase catalytic subunit alpha PRKACA phosphorylates a large number of substrates in the cytoplasm and the nucleus. It regulates the abundance of compartmentalized pools of its regulatory subunits through phosphorylation of PJA2 which binds and ubiquitinates these subunits, leading to their subsequent proteolysis. It is involved in the regulation of platelets in response to thrombin and collagen; maintains circulating platelets in a resting state by phosphorylating proteins in numerous platelet inhibitory pathways when in complex with NF-kappa-B (NFKB1 and NFKB2) and I-kappa-B-alpha (NFKBIA), but thrombin and collagen disrupt these complexes and free active PRKACA stimulates platelets and leads to platelet aggregation by phosphorylating VASP. others Homo sapiens DNA binding of repressor nuclear factor-kappaB p50/p50 depends on phosphorylation of Ser337 by the protein kinase A catalytic subunit 10.1074/jbc.M412180200 hsa04211 Longevity regulating pathway 5566 PRKACB CAMP-Dependent Protein Kinase Catalytic Subunit Beta cAMP-dependent protein kinase catalytic subunit beta PRKACB mediates cAMP-dependent signaling triggered by receptor binding to GPCRs. PKA activation regulates diverse cellular processes such as cell proliferation, the cell cycle, differentiation and regulation of microtubule dynamics, chromatin condensation and decondensation, nuclear envelope disassembly and reassembly, as well as regulation of intracellular transport mechanisms and ion flux. It regulates the abundance of compartmentalized pools of its regulatory subunits through phosphorylation of PJA2 which binds and ubiquitinates these subunits, leading to their subsequent proteolysis. altered intercellular communication Homo sapiens c-MYC activates protein kinase A (PKA) by direct transcriptional activation of the PKA catalytic subunit beta (PKA-CB) gene 10.1038/sj.onc.1205986 hsa04211 Longevity regulating pathway 5567 PRKACG PKA C-Gamma cAMP-dependent protein kinase catalytic subunit gamma PRKACG phosphorylates a large number of substrates in the cytoplasm and the nucleus. others Homo sapiens Molecular cloning of a tissue-specific protein kinase (C gamma) from human testis -- representing a third isoform for the catalytic subunit of cAMP-dependent protein kinase 10.1210/mend-4-3-465 hsa04211 Longevity regulating pathway 5568 PRKAG1 AMPK Gamma1 5'-AMP-activated protein kinase subunit gamma-1 AMP/ATP-binding subunit of AMP-activated protein kinase (AMPK), an energy sensor protein kinase that plays a key role in regulating cellular energy metabolism. In response to reduction of intracellular ATP levels, AMPK activates energy-producing pathways and inhibits energy-consuming processes: inhibits protein, carbohydrate and lipid biosynthesis, as well as cell growth and proliferation. AMPK acts via direct phosphorylation of metabolic enzymes, and by longer-term effects via phosphorylation of transcription regulators. others Homo sapiens AMPK is a direct adenylate charge-regulated protein kinase 10.1126/science.1200094 hsa04211 Longevity regulating pathway 5571 PRKAG2 AMPK Subunit Gamma-2 5'-AMP-activated protein kinase subunit gamma-2 AMP/ATP-binding subunit of AMP-activated protein kinase (AMPK), an energy sensor protein kinase that plays a key role in regulating cellular energy metabolism. In response to reduction of intracellular ATP levels, AMPK activates energy-producing pathways and inhibits energy-consuming processes: inhibits protein, carbohydrate and lipid biosynthesis, as well as cell growth and proliferation. AMPK acts via direct phosphorylation of metabolic enzymes, and by longer-term effects via phosphorylation of transcription regulators. others Homo sapiens CBS domains form energy-sensing modules whose binding of adenosine ligands is disrupted by disease mutations 10.1172/JCI19874 hsa04211 Longevity regulating pathway 51422 PRKAG3 AMPK Gamma3 5'-AMP-activated protein kinase subunit gamma-3 AMP/ATP-binding subunit of AMP-activated protein kinase (AMPK), an energy sensor protein kinase that plays a key role in regulating cellular energy metabolism. In response to reduction of intracellular ATP levels, AMPK activates energy-producing pathways and inhibits energy-consuming processes: inhibits protein, carbohydrate and lipid biosynthesis, as well as cell growth and proliferation. AMPK acts via direct phosphorylation of metabolic enzymes, and by longer-term effects via phosphorylation of transcription regulators. others Homo sapiens CBS domains form energy-sensing modules whose binding of adenosine ligands is disrupted by disease mutations 10.1172/JCI19874 hsa04211 Longevity regulating pathway 53632 PRKCA PKCA protein kinase C, alpha PRKCA is a phorbol ester receptor involved in signal transduction. Gain-of-function mutations in Protein Kinase Cα (PKCα) may promote synaptic defects in Alzheimer's disease. others Homo sapiens PRKCA polymorphism changes the neural basis of episodic remembering in healthy individuals 10.1371/journal.pone.0098018 hsa04150 mTOR signaling pathway 5578 PRKCB PKCB Protein Kinase C Beta Calcium-activated, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase involved in various cellular processes such as regulation of the B-cell receptor (BCR) signalosome, oxidative stress-induced apoptosis, androgen receptor-dependent transcription regulation, insulin signaling and endothelial cells proliferation. Plays a key role in B-cell activation by regulating BCR-induced NF-kappa-B activation. Mediates the activation of the canonical NF-kappa-B pathway (NFKB1) by direct phosphorylation of CARD11/CARMA1 at 'Ser-559', 'Ser-644' and 'Ser-652'. Phosphorylation induces CARD11/CARMA1 association with lipid rafts and recruitment of the BCL10-MALT1 complex as well as MAP3K7/TAK1, which then activates IKK complex, resulting in nuclear translocation and activation of NFKB1. NF-κB related gene Homo sapiens Molecular identification of protein kinase C beta in Alzheimer's disease 10.18632/aging.103994 hsa04064 NF-kappa B signaling pathway 5579 PRKCD ALPS3 protein kinase C, delta Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that plays contrasting roles in cell death and cell survival by functioning as a pro-apoptotic protein during DNA damage-induced apoptosis, but acting as an anti-apoptotic protein during cytokine receptor-initiated cell death, is involved in tumor suppression as well as survival of several cancers, is required for oxygen radical production by NADPH oxidase and acts as positive or negative regulator in platelet functional responses. cellular senescence Homo sapiens Dysregulated Fc Gamma Receptor-Mediated Phagocytosis Pathway in Alzheimer's Disease: Network-Based Gene Expression Analysis 10.1016/j.neurobiolaging.2019.12.001 hsa04140 Autophagy 5580 PRKCQ PRKCT Protein Kinase C Theta Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that mediates non-redundant functions in T-cell receptor (TCR) signaling, including T-cells activation, proliferation, differentiation and survival, by mediating activation of multiple transcription factors such as NF-kappa-B, JUN, NFATC1 and NFATC2. In TCR-CD3/CD28-co-stimulated T-cells, is required for the activation of NF-kappa-B and JUN, which in turn are essential for IL2 production, and participates in the calcium-dependent NFATC1 and NFATC2 transactivation. Mediates the activation of the canonical NF-kappa-B pathway (NFKB1) by direct phosphorylation of CARD11 on several serine residues, inducing CARD11 association with lipid rafts and recruitment of the BCL10-MALT1 complex, which then activates IKK complex, resulting in nuclear translocation and activation of NFKB1. NF-κB related gene Homo sapiens Differentially expressed autophagy-related genes are potential prognostic and diagnostic biomarkers in clear-cell renal cell carcinoma 10.18632/aging.102368 hsa04064 NF-kappa B signaling pathway 5588 PRKDC DNPK1; p350; DNAPK protein kinase, DNA-activated, catalytic polypeptide DNA-PK phosphorylates threonines 5 and 7 of HSP90α, decreasing its chaperone function for clients such as AMP-activated protein kinase (AMPK), which is critical for mitochondrial biogenesis and energy metabolism. mitochondrial dysfunction Homo sapiens DNA-PK Promotes the Mitochondrial, Metabolic, and Physical Decline That Occurs During Aging 10.1016/j.cmet.2017.04.008 hsa04110 Cell cycle 5591 PROP1 CPHD2 PROP paired-like homeobox 1 PROP1 is possibly involved in the ontogenesis of pituitary gonadotropes, as well as somatotropes, lactotropes and caudomedial thyrotropes. others Homo sapiens Insulin/IGF-1 and ROS signaling pathway cross-talk in aging and longevity determination 10.1016/j.mce.2008.11.025 unknown Unknown 5626 PSEN1 FAD; S182; PS1 presenilin 1 The PSEN1 gene has multiple transcriptional variants and its functions could include the cleavage of?APP?and notch receptor protein. cellular senescence Homo sapiens APP Processing and Synaptic Plasticity in presenilin-1 Conditional Knockout Mice 10.1016/s0896-6273(01)00417-2 hsa04310 Wnt signaling pathway 5663 PTEN MMAC1 phosphatase and tensin homolog Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine-phosphorylated proteins. cellular senescence Homo sapiens PTEN, Longevity and Age-Related Diseases 10.3390/biomedicines1010017 hsa04115 p53 signaling pathway 5728 PTGES PIG12 Prostaglandin E Synthase Terminal enzyme of the cyclooxygenase (COX)-2-mediated prostaglandin E2 (PGE2) biosynthetic pathway. Catalyzes the glutathione-dependent oxidoreduction of prostaglandin endoperoxide H2 (PGH2) to prostaglandin E2 (PGE2) in response to inflammatory stimuli (PubMed:18682561, PubMed:10377395, PubMed:12672824, PubMed:12460774, PubMed:10869354, PubMed:12244105). Plays a key role in inflammation response, fever and pain (By similarity). Catalyzes also the oxidoreduction of endocannabinoids into prostaglandin glycerol esters and PGG2 into 15-hydroperoxy-PGE2 (PubMed:12244105, PubMed:12672824). In addition, displays low glutathione transferase and glutathione-dependent peroxidase activities, toward 1-chloro-2,4-dinitrobenzene and 5-hydroperoxyicosatetraenoic acid (5-HPETE), respectively (PubMed:12672824). senescence-associated secretory phenotype Homo sapiens Radiation promotes colorectal cancer initiation and progression by inducing senescence-associated inflammatory responses 10.1038/onc.2015.395 hsa01100 Metabolic pathways 9536 PTGS2 COX2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) PTGS2 is responsible for production of inflammatory prostaglandins. Up-regulation of PTGS2 is also associated with increased cell adhesion, phenotypic changes, resistance to apoptosis and tumor angiogenesis. altered intercellular communication Homo sapiens Ceramide-induced and Age-Associated Increase in Macrophage COX-2 Expression Is Mediated Through Up-Regulation of NF-kappa B Activity 10.1074/jbc.M207470200 hsa04370 VEGF signaling pathway 5743 PTK2 STK2; FAK; FADK 1 protein tyrosine kinase 2 PTK2 is necessary for fitness, egulating cell migration, adhesion, spreading, reorganization of the actin cytoskeleton. altered intercellular communication Homo sapiens PTK2 rs7460 and rs7843014 Polymorphisms and Exceptional Longevity: A Functional Replication Study 10.1089/rej.2014.1570 hsa04935 Growth hormone synthesis, secretion and action 5747 PTK2B CAKB; PYK2; RAFTK protein tyrosine kinase 2 beta Involved in stress response and signal transduction, PTK2B is an important player in a variety of processes including the regulation of ion channels by calcium and MAPK signalling. cellular senescence Homo sapiens Role of Src-specific Phosphorylation Site on Focal Adhesion Kinase for Senescence-Associated Apoptosis Resistance 10.1007/s10495-006-3978-9 hsa04912 GnRH signaling pathway 2185 PTPN1 PTP1B protein tyrosine phosphatase, non-receptor type 1 PTPN1 is a tyrosine-protein phosphatase which acts as a regulator of endoplasmic reticulum unfolded protein response. loss of proteostasis Homo sapiens miR-125a-5p inhibits tumorigenesis in hepatocellular carcinoma 10.18632/aging.102276 hsa04910 Insulin signaling pathway 5770 PTPN11 PTP2C; SHP2 protein tyrosine phosphatase, non-receptor type 11 PTPN11 acts downstream of various receptor and cytoplasmic protein tyrosine kinases to participate in the signal transduction from the cell surface to the nucleus. others Homo sapiens PTPN11 mutations are associated with mild growth hormone resistance in individuals with Noonan syndrome 10.1210/jc.2005-0995 hsa04630 JAK-STAT signaling pathway 5781 PYCR1 P5C Reductase 1 pyrroline-5-carboxylate reductase 1 PYCR1 is a housekeeping enzyme that catalyzes the last step in proline biosynthesis. PYCR1 can utilize both NAD and NADP, but has higher affinity for NAD. PYCR1 is involved in the cellular response to oxidative stress. others Homo sapiens Mutations in PYCR1 cause cutis laxa with progeroid features 10.1038/ng.413 unknown Unknown 5831 RACK1 GNB2L1; Gnb2-rs1; H12.3 receptor for activated C kinase 1 The Receptor for Activated C Kinase 1 (RACK1) is a scaffold protein for different kinases and membrane receptors. It is a key mediator of various pathways and is involved in various biological events including development, immune response, brain activity and cancer. others Homo sapiens Transcriptional regulation of RACK1 and modulation of its expression: Role of steroid hormones and significance in health and aging 10.1016/j.cellsig.2017.02.010 unknown Unknown 10399 RAD27 ERC11; FEN1; RTH1 multifunctional nuclease RAD27 Its deletion led to significant changes of chronological lifespan in yeast, featuring both lifespan shortening and lifespan extension. genomic instability Homo sapiens Identification of evolutionarily conserved genetic regulators of cellular aging 10.1111/j.1474-9726.2010.00637.x unknown Unknown 853747 RAD51 HsRad51; HsT16930; BRCC5; FANCR; RAD51A; RECA RAD51 recombinase RAD51 is involved in DNA unwinding and repair. genomic instability Homo sapiens Insights Into DNA Recombination From the Structure of a RAD51-BRCA2 Complex 10.1038/nature01230 unknown Unknown 5888 RAD52 DNA Repair Protein RAD52 Homolog; Recombination Protein RAD52; RAD52 Homolog, DNA Repair Protein RAD52 homolog, DNA repair protein Coordinated WRN and RAD52 activities are involved in replication fork rescue after DNA damage. genomic instability Homo sapiens WRN Interacts Physically and Functionally With the Recombination Mediator Protein RAD52 10.1074/jbc.M303885200 unknown Unknown 5893 RAE1 Rae1 Protein Homolog; MRNA Export Factor ribonucleic acid export 1 RAE1 plays a role in mitotic bipolar spindle formation. Binds mRNA. RAE1 may function in nucleocytoplasmic transport and in directly or indirectly attaching cytoplasmic mRNPs to the cytoskeleton. others Homo sapiens Rae1 Interaction With NuMA Is Required for Bipolar Spindle Formation 10.1073/pnas.0609582104 unknown Unknown 8480 RB1 RB; PPP1R130; OSRC retinoblastoma 1 Rb is essential for normal mouse development. others Homo sapiens Cellular senescence and tumor suppressor gene p16 10.1002/ijc.27316 hsa04218 Cellular senescence 5925 RB1CC1 RB1-Inducible Coiled-Coil Protein 1 RB1-inducible coiled-coil protein 1 RB1CC1 is involved in autophagy. RB1CC1 regulates early events but also late events of autophagosome formation through direct interaction with Atg16L1. RB1CC1 is involved in repair of DNA damage caused by ionizing radiation, which subsequently improves cell survival by decreasing apoptosis. others Homo sapiens Suppression of Pyk2 kinase and cellular activities by FIP200 10.1083/jcb.149.2.423 hsa04211 Longevity regulating pathway 9821 RECQL4 RecQ4 RecQ helicase-like 4 RECQL4 belongs to RECQ DNA helicase family which has been shown to participate in many aspects of DNA metabolism. RECQL4 participates in multiple DNA pathways. genomic instability Homo sapiens Aging in Rothmund-Thomson Syndrome and Related RECQL4 Genetic Disorders 10.1016/j.arr.2016.06.002 unknown Unknown 9401 RELA p65; NFKB3 v-rel avian reticuloendotheliosis viral oncogene homolog A NF-kappa B, which consists of two polypeptides, p50 (M(r) 50K) and p65/RelA (M(r) 65K), is thought to be a key regulator of genes involved in responses to infection, inflammation and stress. RelA controls inducible, but not basal, transcription in NF-kappa B-regulated pathways. altered intercellular communication Homo sapiens Growing old with nuclear factor-kappaB 10.1379/1466-1268(2002)007<0207:gownfb>2.0.co;2 hsa04211 Longevity regulating pathway 5970 RELB V-Rel Avian Reticuloendotheliosis Viral Oncogene Homolog B RELB Proto-Oncogene, NF-KB Subunit NF-kappa-B is a pleiotropic transcription factor which is present in almost all cell types and is involved in many biological processed such as inflammation, immunity, differentiation, cell growth, tumorigenesis and apoptosis. NF-kappa-B is a homo- or heterodimeric complex formed by the Rel-like domain-containing proteins RELA/p65, RELB, NFKB1/p105, NFKB1/p50, REL and NFKB2/p52. The dimers bind at kappa-B sites in the DNA of their target genes and the individual dimers have distinct preferences for different kappa-B sites that they can bind with distinguishable affinity and specificity. Different dimer combinations act as transcriptional activators or repressors, respectively. NF-κB related gene Homo sapiens Nuclear Factor-κB Dysregulation and α-Synuclein Pathology: Critical Interplay in the Pathogenesis of Parkinson's Disease 10.3389/fnagi.2020.00068 hsa04064 NF-kappa B signaling pathway 5971 RET CDHF12 Ret Proto-Oncogene Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. Phosphorylates PTK2/FAK1. Regulates both cell death/survival balance and positional information. Required for the molecular mechanisms orchestration during intestine organogenesis; involved in the development of enteric nervous system and renal organogenesis during embryonic life, and promotes the formation of Peyer's patch-like structures, a major component of the gut-associated lymphoid tissue. Modulates cell adhesion via its cleavage by caspase in sympathetic neurons and mediates cell migration in an integrin (e.g. ITGB1 and ITGB3)-dependent manner. Involved in the development of the neural crest. Active in the absence of ligand, triggering apoptosis through a mechanism that requires receptor intracellular caspase cleavage. Acts as a dependence receptor; in the presence of the ligand GDNF in somatotrophs (within pituitary), promotes survival and down regulates growth hormone (GH) production, but triggers apoptosis in absence of GDNF. Regulates nociceptor survival and size. Triggers the differentiation of rapidly adapting (RA) mechanoreceptors. Mediator of several diseases such as neuroendocrine cancers; these diseases are characterized by aberrant integrins-regulated cell migration. Mediates, through interaction with GDF15-receptor GFRAL, GDF15-induced cell-signaling in the brainstem which induces inhibition of food-intake. Activates MAPK- and AKT-signaling pathways . Isoform 1 in complex with GFRAL induces higher activation of MAPK-signaling pathway than isoform 2 in complex with GFRAL. others Homo sapiens Associations between Plasma Branched Chain Amino Acids and Health Biomarkers in Response to Resistance Exercise Training Across Age 0.3390/nu12103029 hsa05200 Pathways in cancer 5979 RFC4 A1 37 KDa Subunit Replication factor C subunit 4 The elongation of primed DNA templates by DNA polymerase delta and epsilon requires the action of the accessory proteins proliferating cell nuclear antigen (PCNA) and activator 1. This subunit may be involved in the elongation of the multiprimed DNA template. genomic instability Homo sapiens Studies of the cloned 37-kDa subunit of activator 1 (replication factor C) of HeLa cells 10.1073/pnas.89.12.5211 unknown Unknown 5984 RGN SMP30; RC regucalcin Senescence marker RGN is a calcium binding protein also called regucalcin. Its expression levels decline with age, and RGN has been linked to age-related changes in calcium signalling in the liver of rats. others Homo sapiens The Emerging Role of Regucalcin as a Tumor Suppressor: Facts and Views 10.2174/1566524016666160714124550 unknown Unknown 9104 RHEB GTP-Binding Protein Rheb GTP-binding protein Rheb RHEB activates the protein kinase activity of mTORC1, and thereby plays a role in the regulation of apoptosis. RHEB stimulates the phosphorylation of S6K1 and EIF4EBP1 through activation of mTORC1 signaling. RHEB has low intrinsic GTPase activity. others Homo sapiens Tuberous sclerosis complex-1 and -2 gene products function together to inhibit mammalian target of rapamycin (mTOR)-mediated downstream signaling 10.1073/pnas.202476899 hsa04211 Longevity regulating pathway 6009 RICTOR Rapamycin-Insensitive Companion Of MTOR RPTOR independent companion of MTOR, complex 2 Subunit of mTORC2, which regulates cell growth and survival in response to hormonal signals. mTORC2 is activated by growth factors, but, in contrast to mTORC1, seems to be nutrient-insensitive. mTORC2 seems to function upstream of Rho GTPases to regulate the actin cytoskeleton, probably by activating one or more Rho-type guanine nucleotide exchange factors. deregulated nutrient sensing Homo sapiens mTORC1-activated S6K1 phosphorylates Rictor on threonine 1135 and regulates mTORC2 signaling 10.1128/MCB.00601-09 hsa04150 mTOR signaling pathway 253260 RIPK1 Cell Death Protein RIP Receptor Interacting Serine/Threonine Kinase 1 Serine-threonine kinase which is a key regulator of TNF-mediated apoptosis, necroptosis and inflammatory pathways (PubMed:25459879, PubMed:31827281, PubMed:31827280). Exhibits kinase activity-dependent functions that trigger cell death and kinase-independent scaffold functions regulating inflammatory signaling and cell survival (PubMed:11101870, PubMed:25459879). Initiates ripoptocide which describes cell death that is dependent on RIPK1, be it apoptosis or necroptosis (PubMed:31457011). Upon binding of TNF to TNFR1, RIPK1 is recruited to the TNF-R1 signaling complex (TNF-RSC also known as complex I) where it acts as a scaffold protein promoting cell survival, in part, by activating the canonical NF-kB pathway. NF-κB related gene Homo sapiens TBK1 Suppresses RIPK1-Driven Apoptosis and Inflammation during Development and in Aging 10.1016/j.cell.2018.07.041 hsa04064 NF-kappa B signaling pathway 8737 RORA NR1F1 RAR Related Orphan Receptor A Nuclear receptor that binds DNA as a monomer to ROR response elements (RORE) containing a single core motif half-site 5'-AGGTCA-3' preceded by a short A-T-rich sequence. Key regulator of embryonic development, cellular differentiation, immunity, circadian rhythm as well as lipid, steroid, xenobiotics and glucose metabolism. Considered to have intrinsic transcriptional activity, have some natural ligands like oxysterols that act as agonists (25-hydroxycholesterol) or inverse agonists (7-oxygenated sterols), enhancing or repressing the transcriptional activity, respectively. others Homo sapiens Circadian clock associates with tumor microenvironment in thoracic cancers 10.18632/aging.102450 hsa04710 Circadian rhythm 6095 RPA1 HSSB replication protein A1, 70kDa As part of the heterotrimeric replication protein A complex (RPA/RP-A), RPA1 binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. others Homo sapiens RNA-Seq Analysis of Differentially Expressed Genes Relevant to Mismatch Repair in Aging Hematopoietic Stem-Progenitor Cells 0.1002/jcb.28417 unknown Unknown 6117 RPS6KA5 S6K-Alpha-5 Ribosomal Protein S6 Kinase A5 Serine/threonine-protein kinase that is required for the mitogen or stress-induced phosphorylation of the transcription factors CREB1 and ATF1 and for the regulation of the transcription factors RELA, STAT3 and ETV1/ER81, and that contributes to gene activation by histone phosphorylation and functions in the regulation of inflammatory genes (PubMed:11909979, PubMed:12569367, PubMed:12763138, PubMed:9687510, PubMed:18511904, PubMed:9873047). Phosphorylates CREB1 and ATF1 in response to mitogenic or stress stimuli such as UV-C irradiation, epidermal growth factor (EGF) and anisomycin. senescence-associated secretory phenotype Homo sapiens A principal component meta-analysis on multiple anthropometric traits identifies novel loci for body shape 10.1038/ncomms13357 hsa04010 MAPK signaling pathway 9252 RPS6KB1 Ribosomal Protein S6 Kinase Beta-1 ribosomal protein S6 kinase beta-1 Serine/threonine-protein kinase that acts downstream of mTOR signaling in response to growth factors and nutrients to promote cell proliferation, cell growth and cell cycle progression. It regulates protein synthesis through phosphorylation of EIF4B, RPS6 and EEF2K, and contributes to cell survival by repressing the pro-apoptotic function of BAD. It also plays a role in feedback regulation of mTORC2 by mTORC1 by phosphorylating RICTOR, resulting in the inhibition of mTORC2 and AKT1 signaling. It mediates cell survival by phosphorylating the pro-apoptotic protein BAD and suppressing its pro-apoptotic function. others Homo sapiens Regulation of elongation factor 2 kinase by p90(RSK1) and p70 S6 kinase 10.1093/emboj/20.16.4370 hsa04211 Longevity regulating pathway 6198 RPS6KB2 S6 Kinase-Related Kinase ribosomal protein S6 kinase beta-2 It phosphorylates specifically ribosomal protein S6. It seems to act downstream of mTOR signaling in response to growth factors and nutrients to promote cell proliferation, cell growth and cell cycle progression in an alternative pathway regulated by MEAK7. others Homo sapiens Mammalian EAK-7 activates alternative mTOR signaling to regulate cell proliferation and migration 10.1126/sciadv.aao5838 hsa04211 Longevity regulating pathway 6199 RPTOR P150 Target Of Rapamycin (TOR)-Scaffold Protein Containing WD-Repeats regulatory-associated protein of mTOR It involved in the control of the mammalian target of rapamycin complex 1 (mTORC1) activity which regulates cell growth and survival, and autophagy in response to nutrient and hormonal signals; functions as a scaffold for recruiting mTORC1 substrates. mTORC1 is activated in response to growth factors or amino acids. Growth factor-stimulated mTORC1 activation involves a AKT1-mediated phosphorylation of TSC1-TSC2, which leads to the activation of the RHEB GTPase that potently activates the protein kinase activity of mTORC1. deregulated nutrient sensing Homo sapiens mTOR interacts with raptor to form a nutrient-sensitive complex that signals to the growth machinery 10.1016/s0092-8674(02)00808-5 hsa04211 Longevity regulating pathway 57521 S100B S100; NEF S100 calcium binding protein B It weakly binds calcium but binds zinc very tightly-distinct binding sites with different affinities exist for both ions on each monomer. Physiological concentrations of potassium ion antagonize the binding of both divalent cations, especially affecting high-affinity calcium-binding sites. others Homo sapiens Zinc Binding to S100B Affords Regulation of Trace Metal Homeostasis and Excitotoxicity in the Brain 10.3389/fnmol.2017.00456 unknown Unknown 6285 SDHC CYB560; PGL3 succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa A member of the mitochondrial electron transport chain, SDHC homologues have been implicated in ageing of lower life forms. Mutations in the human SDHC gene have been associated with mitochondrial respiratory chain deficiency. mitochondrial dysfunction Homo sapiens Mutation of a nuclear succinate dehydrogenase gene results in mitochondrial respiratory chain deficiency 10.1038/ng1095-144 hsa05010 Alzheimer disease 6391 SERPINB2 Serpin Family B Member 2 Monocyte Arg-Serpin Inhibits urokinase-type plasminogen activator. The monocyte derived PAI-2 is distinct from the endothelial cell-derived PAI-1. senescence-associated secretory phenotype Homo sapiens An Endogenous Anti-aging Factor, Sonic Hedgehog, Suppresses Endometrial Stem Cell Aging through SERPINB2 10.1016/j.ymthe.2019.04.019 hsa04610 Complement and coagulation cascades 5055 SERPINE1 Endothelial Plasminogen Activator Inhibitor serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 Serine protease inhibitor. SERPINE1 inhibits TMPRSS7. It is a primary inhibitor of tissue-type plasminogen activator (PLAT) and urokinase-type plasminogen activator (PLAU). As PLAT inhibitor, it is required for fibrinolysis down-regulation and is responsible for the controlled degradation of blood clots. As PLAU inhibitor, it is involved in the regulation of cell adhesion and spreading. cellular senescence Homo sapiens Plasminogen Activator inhibitor-1 Is a Critical Downstream Target of p53 in the Induction of Replicative Senescence 10.1038/ncb1448 hsa04115 p53 signaling pathway 5054 SESN1 P53 Regulated PA26 Nuclear Protein Sestrin-1 SESN1 functions as an intracellular leucine sensor that negatively regulates the TORC1 signaling pathway through the GATOR complex. In absence of leucine, SESN1 binds the GATOR subcomplex GATOR2 and prevents TORC1 signaling. Binding of leucine to SESN2 disrupts its interaction with GATOR2 thereby activating the TORC1 signaling pathway. This stress-inducible metabolic regulator may also play a role in protection against oxidative and genotoxic stresses. others Homo sapiens Regeneration of peroxiredoxins by p53-regulated sestrins, homologs of bacterial AhpD 10.1126/science.1095569 hsa04211 Longevity regulating pathway 27244 SESN2 SEST2 Sestrin-2 SESN2 functions as an intracellular leucine sensor that negatively regulates the TORC1 signaling pathway through the GATOR complex. In absence of leucine, SESN2 binds the GATOR subcomplex GATOR2 and prevents TORC1 signaling. This stress-inducible metabolic regulator also plays a role in protection against oxidative and genotoxic stresses. SESN2 may negatively regulate protein translation in response to endoplasmic reticulum stress, via TORC1. others Homo sapiens Regeneration of peroxiredoxins by p53-regulated sestrins, homologs of bacterial AhpD 10.1126/science.1095569 hsa04211 Longevity regulating pathway 83667 SESN3 SEST3 Sestrin-3 SESN3 may function as an intracellular leucine sensor that negatively regulates the TORC1 signaling pathway. SESN3 may also regulate the insulin-receptor signaling pathway through activation of TORC2. This metabolic regulator may also play a role in protection against oxidative and genotoxic stresses. altered intercellular communication Homo sapiens The Sestrins interact with GATOR2 to negatively regulate the amino-acid-sensing pathway upstream of mTORC1 10.1016/j.celrep.2014.09.014 hsa04211 Longevity regulating pathway 143686 SHC1 SHCA; SHC SHC (Src homology 2 domain containing) transforming protein 1 Signaling adapter that couples activated growth factor receptors to signaling pathways. SHC1 participates in a signaling cascade initiated by activated KIT and KITLG/SCF. others Homo sapiens Association Analysis of the SHC1 Gene Locus With Longevity in the Japanese Population 10.1007/s00109-003-0485-0 hsa04910 Insulin signaling pathway 6464 SIN3A KIAA0700; DKFZP434K2235 SIN3 transcription regulator family member A The protein encoded by this gene is a transcriptional regulatory protein. It contains paired amphipathic helix (PAH) domains, which are important for protein-protein interactions and may mediate repression by the Mad-Max complex. cellular senescence Homo sapiens Expression of Transcriptional Repressor Protein mSin3A but Not mSin3B Is Induced During Neuronal Apoptosis 10.1006/bbrc.1998.9629 unknown Unknown 25942 SIRT1 SIR2L1 sirtuin 1 SIRT1 is a NAD-dependent deacetylase, which can regulate a number of processes by deacetylating key proteins, such as TP53. epigenetic alterations Homo sapiens Identification of serum sirtuins as novel noninvasive protein markers for frailty 10.1111/acel.12260 hsa04211 Longevity regulating pathway 23411 SIRT2 Sirtuin 2 Silent Mating Type Information Regulation 2 Homolog This gene encodes a member of the sirtuin family of proteins, homologs to the yeast Sir2 protein. Members of the sirtuin family are characterized by a sirtuin core domain and grouped into four classes. The functions of human sirtuins have not yet been determined; however, yeast sirtuin proteins are known to regulate epigenetic gene silencing and suppress recombination of rDNA. others Homo sapiens The human Sir2 ortholog SIRT2 is an NAD+-dependent tubulin deacetylase 10.1016/s1097-2765(03)00038-8 unknown Unknown 22933 SIRT3 NAD-Dependent Protein Deacetylase Sirtuin-3 sirtuin 3 NAD-dependent protein deacetylase. SIRT3 activates or deactivates mitochondrial target proteins by deacetylating key lysine residues. SIRT3 contributes to the regulation of the cellular energy metabolism. SIRT3 is important for regulating tissue-specific ATP levels. mitochondrial dysfunction Homo sapiens The human silent information regulator (Sir)2 homologue hSIRT3 is a mitochondrial nicotinamide adenine dinucleotide-dependent deacetylase https://doi.org/10.1083/jcb.200205057 unknown Unknown 23410 SIRT6 NAD-Dependent Protein Deacetylase Sirtuin-6; SIR2-Like Protein 6 sirtuin 6 NAD-dependent protein deacetylase. SIRT6 has deacetylase activity towards histone H3K9Ac and H3K56Ac. SIRT6 modulates acetylation of histone H3 in telomeric chromatin during the S-phase of the cell cycle. SIRT6 acts as a corepressor of the transcription factor HIF1A to control the expression of multiple glycolytic genes to regulate glucose homeostasis. epigenetic alterations Homo sapiens Structure and Biochemical Functions of SIRT6 10.1074/jbc.M111.218990 unknown Unknown 51548 SIRT7 Regulatory Protein SIR2 Homolog 7 sirtuin 7 NAD-dependent protein-lysine deacylase that can act both as a deacetylase or deacylase (desuccinylase, depropionylase and deglutarylase), depending on the context. It specifically mediates deacetylation of histone H3 at 'Lys-18' (H3K18Ac). In contrast to other histone deacetylases, it displays strong preference for a specific histone mark, H3K18Ac, directly linked to control of gene expression. H3K18Ac is mainly present around the transcription start site of genes and has been linked to activation of nuclear hormone receptors; SIRT7 thereby acts as a transcription represso. epigenetic alterations Homo sapiens SIRT7 Links H3K18 Deacetylation to Maintenance of Oncogenic Transformation 10.1038/nature11043 unknown Unknown 51547 SLC13A1 Renal Sodium/Sulfate Cotransporter solute carrier family 13 (sodium/sulfate symporter), member 1 Sodium/sulfate cotransporter that mediates sulfate reabsorption in the kidney. others Homo sapiens The human renal sodium sulfate cotransporter (SLC13A1; hNaSi-1) cDNA and gene: organization, chromosomal localization, and functional characterization 10.1006/geno.2000.6404 unknown Unknown 6561 SNCG BCSG1; SR; persyn synuclein, gamma (breast cancer-specific protein 1) SNCG intracellularly associates with BubR1 together suggest that SNCG expression compromises the mitotic checkpoint control by inhibition of the normal function of BubR1, thereby promoting genetic instability. genomic instability Homo sapiens Synuclein Gamma Inhibits the Mitotic Checkpoint Function and Promotes Chromosomal Instability of Breast Cancer Cells 10.1007/s10549-005-6938-0 unknown Unknown 6623 SOCS2 Cytokine-Inducible SH2 Protein 2 suppressor of cytokine signaling 2 SOCS family proteins form part of a classical negative feedback system that regulates cytokine signal transduction. SOCS2 appears to be a negative regulator in the growth hormone/IGF1 signaling pathway. Probable substrate recognition component of a SCF-like ECS (Elongin BC-CUL2/5-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. altered intercellular communication Homo sapiens Interaction of human suppressor of cytokine signaling (SOCS)-2 with the insulin-like growth factor-I receptor 10.1006/geno.2000.6404 hsa04910 Insulin signaling pathway 8835 SOD1 IPOA; ALS; ALS1 superoxide dismutase 1, soluble In a more recent study the kidneys of SOD1-null mice exhibited increased DNA damage, increased senescent cells, and increased inflammation. Subjecting these mice to dietary restriction attenuated these effects. cellular senescence Homo sapiens Amyotrophic lateral sclerosis: a proposed mechanism 10.1073/pnas.132260399 unknown Unknown 6647 SOD2 Superoxide Dismutase 2; Mn-SOD; MNSOD superoxide dismutase 2, mitochondrial Overexpression of SOD2 in aging mouse hearts demonstrated a protective role against oxidative stress, fibrosis and apoptosis. others Homo sapiens The polymorphism of manganese superoxide dismutase is associated with diabetic nephropathy in Japanese type 2 diabetic patients 10.1007/s100380300021 hsa04211 Longevity regulating pathway 6648 SP1 TSFP1 Sp1 transcription factor SP1 regulates ageing-related genes such as?WRN or cellular senescence-related genes like?CDKN2A. genomic instability Homo sapiens Sp1 Is Essential for p16 Expression in Homo sapiens Diploid Fibroblasts During Senescence 10.1371/journal.pone.0000164 hsa04350 TGF-beta signaling pathway 6667 SPRTN DNA Damage-Targeting VCP (P97) Adaptor SprT-like N-terminal domain SPRTN is recruited to sites of UV damage and interacts with ubiquitinated PCNA and RAD18, the E3 ubiquitin ligase that monoubiquitinates PCNA. SPRTN facilitates chromatin association of RAD18 and is required for efficient PCNA monoubiquitination, promoting a feed-forward loop to enhance PCNA ubiquitination and translesion DNA synthesis. SPRTN acts as a regulator of TLS by recruiting VCP/p97 to sites of DNA damage, possibly leading to extraction of DNA polymerase eta (POLH) by VCP/p97 to prevent excessive translesion DNA synthesis and limit the incidence of mutations induced by DNA damage. genomic instability Homo sapiens DNA-protein crosslink repair: proteases as DNA repair enzymes 10.1016/j.tibs.2014.10.012 unknown Unknown 83932 SQSTM1 Autophagy Receptor P62 sequestosome 1 Autophagy receptor required for selective macroautophagy (aggrephagy). SQSTM1 functions as a bridge between polyubiquitinated cargo and autophagosomes. SQSTM1 interacts directly with both the cargo to become degraded and an autophagy modifier of the MAP1 LC3 family. Along with WDFY3, SQSTM1 is involved in the formation and autophagic degradation of cytoplasmic ubiquitin-containing inclusions (p62 bodies, ALIS/aggresome-like induced structures). deregulated nutrient sensing Homo sapiens Sequestosome 1/p62 is a polyubiquitin chain binding protein involved in ubiquitin proteasome degradation 10.1128/MCB.24.18.8055-8068.2004 hsa04218 Cellular senescence 8878 SST SMS somatostatin SST inhibits the secretion of pituitary hormones, including that of growth hormone/somatotropin (GH1), PRL, ACTH, luteinizing hormone (LH) and TSH. others Homo sapiens Hypermethylation of BDNF and SST Genes in the Orbital Frontal Cortex of Older Individuals: A Putative Mechanism for Declining Gene Expression With Age 10.1038/npp.2015.107 hsa04935 Growth hormone synthesis, secretion and action 6750 SSTR3 Somatostatin Receptor 3; Somatostatin Receptor Type 3 somatostatin receptor 3 It have been associated with melanoma. others Homo sapiens Expression of Somatostatin Receptors in Uveal Melanomas 10.1167/iovs.02-0481 hsa04935 Growth hormone synthesis, secretion and action 6753 STAT3 APRF; ADMIO1 signal transducer and activator of transcription 3 (acute-phase response factor) Signal transducer and transcription activator that mediates cellular responses to interleukins, KITLG/SCF, LEP and other growth factors. cellular senescence Homo sapiens Inhibition of JAK-STAT signaling stimulates adult satellite cell function 10.1038/nm.3655 hsa04935 Growth hormone synthesis, secretion and action 6774 STAT5A STAT5; MGF signal transducer and activator of transcription 5A STAT5A carries out a dual function: signal transduction and activation of transcription. STAT5A mediates cellular responses to the cytokine KITLG/SCF and other growth factors. cellular senescence Homo sapiens SOCS1 Regulates Senescence and Ferroptosis by Modulating the Expression of p53 Target Genes 10.18632/aging.101306 hsa04935 Growth hormone synthesis, secretion and action 6776 STAT5B STAT5 signal transducer and activator of transcription 5B STAT5B carries out a dual function: signal transduction and activation of transcription. STAT5B mediates cellular responses to the cytokine KITLG/SCF and other growth factors. STAT5B binds to the GAS element and activates PRL-induced transcription. STAT5B positively regulates hematopoietic/erythroid differentiation. cellular senescence Homo sapiens Direct Targeting Options for STAT3 and STAT5 in Cancer 10.3390/cancers11121930 hsa04935 Growth hormone synthesis, secretion and action 6777 STK11 PJS; LKB1 serine/threonine kinase 11 STK11 appears to be involved in TP53-related apoptosis and regulates specific p53-dependent apoptosis pathways. cellular senescence Homo sapiens The Peutz-Jegher Gene Product LKB1 Is a Mediator of p53-dependent Cell Death 10.1016/s1097-2765(01)00258-1 hsa04211 Longevity regulating pathway 6794 STUB1 Carboxy Terminus Of Hsp70-Interacting Protein STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase E3 ubiquitin-protein ligase which targets misfolded chaperone substrates towards proteasomal degradation. STUB1 collaborates with ATXN3 in the degradation of misfolded chaperone substrates: ATXN3 restricting the length of ubiquitin chain attached to STUB1/CHIP substrates and preventing further chain extension. STUB1 may regulate myosin assembly in striated muscles together with UBE4B and VCP/p97 by targeting myosin chaperone UNC45B for proteasomal degradation. STUB1 mediates ubiquitination of RIPK3 leading to its subsequent proteasome-dependent degradation. loss of proteostasis Homo sapiens CHIP/Stub1 functions as a tumor suppressor and represses NF-κB-mediated signaling in colorectal cancer https://doi.org/10.1093/carcin/bgt393 unknown Unknown 10273 SUMO1 PIC1; GMP1; SMT3C small ubiquitin-like modifier 1 SUMO1 is a small protein that interacts with several partners and hence is related to many processes, including DNA repair and signal transduction. genomic instability Homo sapiens SUMO suppresses and MYC amplifies transcription globally by regulating CDK9 sumoylation 10.1038/s41422-018-0023-9 unknown Unknown 7341 SUN1 SUN Domain-Containing Protein 1 Sad1 and UNC84 domain containing 1 As a component of the LINC (LInker of Nucleoskeleton and Cytoskeleton) complex involved in the connection between the nuclear lamina and the cytoskeleton. SUN1 is involved in telomere attachment to nuclear envelope in the prophase of meiosis implicating a SUN1/2:KASH5 LINC complex in which SUN1 and SUN2 seem to act at least partial redundantly. SUN1 is required for gametogenesis and involved in selective gene expression of coding and non-coding RNAs needed for gametogenesis. SUN1 may play a role in DNA repair by suppressing non-homologous end joining repair to facilitate the repair of DNA cross-links. others Homo sapiens Telomere anchoring at the nuclear periphery requires the budding yeast Sad1-UNC-84 domain protein Mps3 10.1083/jcb.200706040 unknown Unknown 23353 SYK P72-Syk Spleen Associated Tyrosine Kinase Non-receptor tyrosine kinase which mediates signal transduction downstream of a variety of transmembrane receptors including classical immunoreceptors like the B-cell receptor (BCR). Regulates several biological processes including innate and adaptive immunity, cell adhesion, osteoclast maturation, platelet activation and vascular development. Assembles into signaling complexes with activated receptors at the plasma membrane via interaction between its SH2 domains and the receptor tyrosine-phosphorylated ITAM domains. The association with the receptor can also be indirect and mediated by adapter proteins containing ITAM or partial hemITAM domains. The phosphorylation of the ITAM domains is generally mediated by SRC subfamily kinases upon engagement of the receptor. More rarely signal transduction via SYK could be ITAM-independent. Direct downstream effectors phosphorylated by SYK include VAV1, PLCG1, PI-3-kinase, LCP2 and BLNK. NF-κB related gene Homo sapiens Caffeoyl-Prolyl-Histidine Amide Inhibits Fyn and Alleviates Atopic Dermatitis-Like Phenotypes via Suppression of NF-κB Activation 10.3390/ijms21197160 hsa04064 NF-kappa B signaling pathway 6850 TAB1 MAP3K7IP1 TGF-Beta Activated Kinase 1 (MAP3K7) Binding Protein 1 May be an important signaling intermediate between TGFB receptors and MAP3K7/TAK1. May play an important role in mammalian embryogenesis. NF-κB related gene Homo sapiens Genome-Wide Association Transethnic Meta-Analyses Identifies Novel Associations Regulating Coagulation Factor VIII and von Willebrand Factor Plasma Levels 10.1161/CIRCULATIONAHA.118.034532 hsa04064 NF-kappa B signaling pathway 10454 TAB2 MAP3K7IP2 TGF-Beta Activated Kinase 1 (MAP3K7) Binding Protein 2 Adapter linking MAP3K7/TAK1 and TRAF6. Promotes MAP3K7 activation in the IL1 signaling pathway. The binding of 'Lys-63'-linked polyubiquitin chains to TAB2 promotes autophosphorylation of MAP3K7 at 'Thr-187'. Involved in heart development. NF-κB related gene Homo sapiens Activation mechanism of c-Jun amino-terminal kinase in the course of neural differentiation of P19 embryonic carcinoma cells 10.1074/jbc.M406610200 hsa04064 NF-kappa B signaling pathway 23118 TAF1 NSCL2; TAFII250; KAT4; TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa TAF1 is essential in cell cycle progression and involved in transcription as part of the TFIID transcription factor together with TBP. cellular senescence Homo sapiens The p250 subunit of native TATA box-binding factor TFIID is the cell-cycle regulatory protein CCG1 10.1038/362179a0 unknown Unknown 6872 TBP TFIID; GTF2D1; SCA17 TATA box binding protein TBP is part of the TFIID general transcription factor. Because of its central role in the activation of eukaryotic genes, TBP is potentially involved in a large variety of processes. genomic instability Homo sapiens RNA Polymerase II Transcription in Murine Cells Lacking the TATA Binding Protein 10.1126/science.1076327 unknown Unknown 6908 TCF3 ITF1; E2A transcription factor 3 Transcriptional regulator. TCF3 is involved in the initiation of neuronal differentiation. Heterodimers between TCF3 and tissue-specific basic helix-loop-helix (bHLH) proteins play major roles in determining tissue-specific cell fate during embryogenesis, like muscle or early B-cell differentiation. cellular senescence Homo sapiens Hedgehog Signaling Maintains Hair Follicle Stem Cell Phenotype in Young and Aged Human Skin 10.1111/j.1474-9726.2009.00526.x hsa04550 Signaling pathways regulating pluripotency of stem cells 6929 TERC PFBMFT2; DKCA1 telomerase RNA component Telomerase RNA component,involved in telomere maintenance as template in telomeric DNA synthesis,transcription up-regulated by endogeneous TERT. telomere attrition Homo sapiens HuR Regulates Telomerase Activity Through TERC Methylation 10.1038/s41467-018-04617-7 unknown Unknown 7012 TERF1 PIN2; TRF1; TRF telomeric repeat binding factor (NIMA-interacting) 1 TRF1 is an essential component of shelterin, with important roles in telomere protection and telomere replication. telomere attrition Homo sapiens Control of human telomere length by TRF1 and TRF2 10.1128/mcb.20.5.1659-1668.2000 unknown Unknown 7013 TERF2 TRF2; TRBF2 telomeric repeat binding factor 2 TRF2 is essential for telomere capping owing to its roles in suppressing an ATM-dependent DNA damage response (DDR) at chromosome ends and inhibiting end-to-end chromosome fusions. telomere attrition Homo sapiens TRF2 recruits the Werner syndrome (WRN) exonuclease for processing of telomeric DNA 10.1038/sj.onc.1206906 unknown Unknown 7014 TERT HEST2; TCS1 telomerase reverse transcriptase Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. telomere attrition Homo sapiens GWAS of Epigenetic Aging Rates in Blood Reveals a Critical Role for TERT 10.1038/s41467-017-02697-5 unknown Unknown 7015 TFAP2A AP-2; TFAP2; AP2TF transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) Sequence-specific DNA-binding protein that interacts with inducible viral and cellular enhancer elements to regulate transcription of selected genes. genomic instability Homo sapiens Age related expression of Werner's syndrome protein in selected tissues and coexpression of transcription factors 10.1136/jcp.55.3.195 unknown Unknown 7020 TFDP1 Dp-1; DRTF1; DP1 transcription factor Dp-1 TFDP1 is a transcription factor that may play a role in cell cycle regulation and apoptosis. cellular senescence Homo sapiens Reduction of Total E2F/DP Activity Induces Senescence-Like Cell Cycle Arrest in Cancer Cells Lacking Functional pRB and p53 10.1083/jcb.200411093 hsa04110 Cell cycle 7027 TGFB1 CED; TGFbeta; TGFB transforming growth factor, beta 1 The variability of the TGF-beta1 gene may affect longevity by playing a role in inflamm-aging. altered intercellular communication Homo sapiens The G/C915 Polymorphism of Transforming Growth Factor beta1 Is Associated With Homo sapiens Longevity: A Study in Italian Centenarians 10.1111/j.1474-9728.2004.00129.x hsa04218 Cellular senescence 7040 TICAM1 TRIF Toll Like Receptor Adaptor Molecule 1 Functions as sorting adapter in different signaling pathways to facilitate downstream signaling leading to type I interferon induction. In TLR4 signaling, physically bridges TLR4 and TICAM1 and functionally transmits signal to TICAM1 in early endosomes after endocytosis of TLR4. In TLR2 signaling, physically bridges TLR2 and MYD88 and is required for the TLR2-dependent movement of MYD88 to endosomes following ligand engagement . Involved in IL-18 signaling and is proposed to function as a sorting adapter for MYD88 in IL-18 signaling during adaptive immune response . Forms a complex with RAB11FIP2 that is recruited to the phagosomes to promote the activation of the actin-regulatory GTPases RAC1 and CDC42 and subsequent phagocytosis of Gram-negative bacteria. NF-κB related gene Homo sapiens Impact of age, BMI and HbA1c levels on the genome-wide DNA methylation and mRNA expression patterns in human adipose tissue and identification of epigenetic biomarkers in blood 10.1093/hmg/ddv124 hsa04064 NF-kappa B signaling pathway 148022 TIMP1 CLGI TIMP Metallopeptidase Inhibitor 1 Metalloproteinase inhibitor that functions by forming one to one complexes with target metalloproteinases, such as collagenases, and irreversibly inactivates them by binding to their catalytic zinc cofactor. Acts on MMP1, MMP2, MMP3, MMP7, MMP8, MMP9, MMP10, MMP11, MMP12, MMP13 and MMP16. Does not act on MMP14. Also functions as a growth factor that regulates cell differentiation, migration and cell death and activates cellular signaling cascades via CD63 and ITGB1. Plays a role in integrin signaling. Mediates erythropoiesis in vitro; but, unlike IL3, it is species-specific, stimulating the growth and differentiation of only human and murine erythroid progenitors. loss of proteostasis Homo sapiens Matrix Metalloproteinases and Tissue Inhibitors of Metalloproteinases in Extracellular Matrix Remodeling during Left Ventricular Diastolic Dysfunction and Heart Failure with Preserved Ejection Fraction: A Systematic Review and Meta-Analysis 10.3390/ijms21186742 hsa04066 HIF-1 signaling pathway 7076 TIMP2 CSC-21K TIMP Metallopeptidase Inhibitor 2 Complexes with metalloproteinases (such as collagenases) and irreversibly inactivates them by binding to their catalytic zinc cofactor. Known to act on MMP-1, MMP-2, MMP-3, MMP-7, MMP-8, MMP-9, MMP-10, MMP-13, MMP-14, MMP-15, MMP-16 and MMP-19. senescence-associated secretory phenotype Homo sapiens The effect of aging in primary human dermal fibroblasts 10.1371/journal.pone.0219165 unknown Unknown 7077 TIRAP MyD88-2 TIR Domain Containing Adaptor Protein Adapter involved in TLR2 and TLR4 signaling pathways in the innate immune response. Acts via IRAK2 and TRAF-6, leading to the activation of NF-kappa-B, MAPK1, MAPK3 and JNK, and resulting in cytokine secretion and the inflammatory response. Positively regulates the production of TNF-alpha and interleukin-6. NF-κB related gene Homo sapiens Bidirectional, Temporal Associations of Sleep with Positive Events, Affect, and Stressors in Daily Life Across a Week 10.1007/s12160-016-9864-y hsa04064 NF-kappa B signaling pathway 114609 TLR4 ARMD10 Toll Like Receptor 4 Cooperates with LY96 and CD14 to mediate the innate immune response to bacterial lipopolysaccharide (LPS) . Acts via MYD88, TIRAP and TRAF6, leading to NF-kappa-B activation, cytokine secretion and the inflammatory response . Also involved in LPS-independent inflammatory responses triggered by free fatty acids, such as palmitate, and Ni(2+). Responses triggered by Ni(2+) require non-conserved histidines and are, therefore, species-specific. Both M.tuberculosis HSP70 (dnaK) and HSP65 (groEL-2) act via this protein to stimulate NF-kappa-B expression. NF-κB related gene Homo sapiens DUSP facilitates RPMI8226 myeloma cell aging and inhibited TLR4 expression 10.26355/eurrev_201809_15939 hsa04064 NF-kappa B signaling pathway 7099 TMEM67 Meckelin Transmembrane Protein 67 Required for ciliary structure and function. Part of the tectonic-like complex which is required for tissue-specific ciliogenesis and may regulate ciliary membrane composition (By similarity). Involved in centrosome migration to the apical cell surface during early ciliogenesis. Involved in the regulation of cilia length and appropriate number through the control of centrosome duplication. Required for cell branching morphology. Essential for endoplasmic reticulum-associated degradation (ERAD) of surfactant protein C (SFTPC). others Homo sapiens Hydrocephalus in a rat model of Meckel Gruber syndrome with a TMEM67 mutation 10.1038/s41598-018-37620-5 unknown Unknown 91147 TNF TNFSF2; DIF; TNF-alpha tumor necrosis factor A cytokine involved in the immune response, TNF can induce cell death in some tumour cells. It can also induce cellular proliferation and differentiation. altered intercellular communication Homo sapiens The tumor necrosis factor alpha -308G>A polymorphism is associated with dementia in the oldest old 10.1111/j.1532-5415.2004.52369.x hsa04150 mTOR signaling pathway 7124 TNFAIP3 Zinc Finger Protein A20 TNF Alpha Induced Protein 3 Ubiquitin-editing enzyme that contains both ubiquitin ligase and deubiquitinase activities. Involved in immune and inflammatory responses signaled by cytokines, such as TNF-alpha and IL-1 beta, or pathogens via Toll-like receptors (TLRs) through terminating NF-kappa-B activity. Essential component of a ubiquitin-editing protein complex, comprising also RNF11, ITCH and TAX1BP1, that ensures the transient nature of inflammatory signaling pathways. In cooperation with TAX1BP1 promotes disassembly of E2-E3 ubiquitin protein ligase complexes in IL-1R and TNFR-1 pathways; affected are at least E3 ligases TRAF6, TRAF2 and BIRC2, and E2 ubiquitin-conjugating enzymes UBE2N and UBE2D3. In cooperation with TAX1BP1 promotes ubiquitination of UBE2N and proteasomal degradation of UBE2N and UBE2D3. NF-κB related gene Homo sapiens TNFAIP3 Plays a Role in Aging of the Hematopoietic System 10.3389/fimmu.2020.536442 hsa04064 NF-kappa B signaling pathway 7128 TNFRSF10C TRID TNF Receptor Superfamily Member 10c Receptor for the cytotoxic ligand TRAIL. Lacks a cytoplasmic death domain and hence is not capable of inducing apoptosis. May protect cells against TRAIL mediated apoptosis by competing with TRAIL-R1 and R2 for binding to the ligand. senescence-associated secretory phenotype Homo sapiens CSF protein changes associated with hippocampal sclerosis risk gene variants highlight impact of GRN/PGRN 10.1016/j.exger.2017.01.025 hsa04060 Cytokine-cytokine receptor interaction 8794 TNFRSF11A RANK TNF Receptor Superfamily Member 11a Receptor for TNFSF11/RANKL/TRANCE/OPGL; essential for RANKL-mediated osteoclastogenesis. Involved in the regulation of interactions between T-cells and dendritic cells. NF-κB related gene Homo sapiens A genome-wide association study of myasthenia gravis 10.1001/jamaneurol.2014.4103 hsa04064 NF-kappa B signaling pathway 8792 TNFRSF11B Osteoprotegerin TNF Receptor Superfamily Member 11b Acts as decoy receptor for TNFSF11/RANKL and thereby neutralizes its function in osteoclastogenesis. Inhibits the activation of osteoclasts and promotes osteoclast apoptosis in vitro. Bone homeostasis seems to depend on the local ratio between TNFSF11 and TNFRSF11B. May also play a role in preventing arterial calcification. May act as decoy receptor for TNFSF10/TRAIL and protect against apoptosis. TNFSF10/TRAIL binding blocks the inhibition of osteoclastogenesis. others Homo sapiens Melatonin-micronutrients Osteopenia Treatment Study (MOTS): a translational study assessing melatonin, strontium (citrate), vitamin D3 and vitamin K2 (MK7) on bone density, bone marker turnover and health related quality of life in postmenopausal osteopen 10.18632/aging.101158 hsa04060 Cytokine-cytokine receptor interaction 4982 TNFRSF13C CD268 TNF Receptor Superfamily Member 13C B-cell receptor specific for TNFSF13B/TALL1/BAFF/BLyS. Promotes the survival of mature B-cells and the B-cell response. NF-κB related gene Homo sapiens Recurrent respiratory tract infections (RRTI) in the elderly: A late onset mild immunodeficiency? 10.1016/j.clim.2017.05.008 hsa04064 NF-kappa B signaling pathway 115650 TNFRSF1A TNF-R-I TNF Receptor Superfamily Member 1A Receptor for TNFSF2/TNF-alpha and homotrimeric TNFSF1/lymphotoxin-alpha. The adapter molecule FADD recruits caspase-8 to the activated receptor. The resulting death-inducing signaling complex (DISC) performs caspase-8 proteolytic activation which initiates the subsequent cascade of caspases (aspartate-specific cysteine proteases) mediating apoptosis. Contributes to the induction of non-cytocidal TNF effects including anti-viral state and activation of the acid sphingomyelinase. senescence-associated secretory phenotype Homo sapiens Sulforaphane alleviates cadmium-induced toxicity in human mesenchymal stem cells through POR and TNFSF10 genes expression 10.1016/j.biopha.2019.108896 hsa04010 MAPK signaling pathway 7132 TNFRSF1B TNFBR TNF Receptor Superfamily Member 1B Receptor with high affinity for TNFSF2/TNF-alpha and approximately 5-fold lower affinity for homotrimeric TNFSF1/lymphotoxin-alpha. The TRAF1/TRAF2 complex recruits the apoptotic suppressors BIRC2 and BIRC3 to TNFRSF1B/TNFR2. This receptor mediates most of the metabolic effects of TNF-alpha. Isoform 2 blocks TNF-alpha-induced apoptosis, which suggests that it regulates TNF-alpha function by antagonizing its biological activity. senescence-associated secretory phenotype Homo sapiens Association of TNF Receptor 2 and CRP with GFR Decline in the General Nondiabetic Population 10.2215/CJN.09280916 hsa04060 Cytokine-cytokine receptor interaction 7133 TNFSF11 RANKL TNF Superfamily Member 11 Cytokine that binds to TNFRSF11B/OPG and to TNFRSF11A/RANK. Osteoclast differentiation and activation factor. Augments the ability of dendritic cells to stimulate naive T-cell proliferation. May be an important regulator of interactions between T-cells and dendritic cells and may play a role in the regulation of the T-cell-dependent immune response. May also play an important role in enhanced bone-resorption in humoral hypercalcemia of malignancy. Induces osteoclastogenesis by activating multiple signaling pathways in osteoclast precursor cells, chief among which is induction of long lasting oscillations in the intracellular concentration of Ca (2+) resulting in the activation of NFATC1, which translocates to the nucleus and induces osteoclast-specific gene transcription to allow differentiation of osteoclasts. During osteoclast differentiation, in a TMEM64 and ATP2A2-dependent manner induces activation of CREB1 and mitochondrial ROS generation necessary for proper osteoclast generation. NF-κB related gene Homo sapiens Melatonin-micronutrients Osteopenia Treatment Study (MOTS): a translational study assessing melatonin, strontium (citrate), vitamin D3 and vitamin K2 (MK7) on bone density, bone marker turnover and health related quality of life in postmenopausal osteopen 10.18632/aging.101158 hsa04064 NF-kappa B signaling pathway 8600 TNFSF13B BAFF TNF Superfamily Member 13 Cytokine that binds to TNFRSF13B/TACI and TNFRSF17/BCMA. TNFSF13/APRIL binds to the same 2 receptors. Together, they form a 2 ligands -2 receptors pathway involved in the stimulation of B- and T-cell function and the regulation of humoral immunity. A third B-cell specific BAFF-receptor (BAFFR/BR3) promotes the survival of mature B-cells and the B-cell response. NF-κB related gene Homo sapiens Overexpression of the Cytokine BAFF and Autoimmunity Risk 10.1056/NEJMoa1610528 hsa04064 NF-kappa B signaling pathway 10673 TNFSF14 HVEM-L TNF Superfamily Member 14 Cytokine that binds to TNFRSF3/LTBR. Binding to the decoy receptor TNFRSF6B modulates its effects. Acts as a ligand for TNFRSF14/HVEM . Upon binding to TNFRSF14/HVEM, delivers costimulatory signals to T cells, leading to T cell proliferation and IFNG production . NF-κB related gene Homo sapiens LIGHT/TNFSF14 is increased in patients with type 2 diabetes mellitus and promotes islet cell dysfunction and endothelial cell inflammation in vitro 10.1007/s00125-016-4036-y hsa04064 NF-kappa B signaling pathway 8740 TOP1 DNA Topoisomerase I; Topoisomerase (DNA) I; DNA Topoisomerase 1 topoisomerase (DNA) I TOP1 may also be important in the regulation of various brain functions and its activity is age-dependent. others Homo sapiens Telomeric DNA damage by topoisomerase I. A possible mechanism for cell killing by camptothecin 10.1074/jbc.M309779200 unknown Unknown 7150 TOP2A DNA Topoisomerase II Alpha; Topoisomerase (DNA) II Alpha 170kDa; TP2A topoisomerase (DNA) II alpha RECQL5 co-localizes with Topoisomerase IIα during S-phase of the cell cycle. Cells with stable depletions of RECQL5 display a slow proliferation rate, a G2/M cell cycle arrest and late S-phase cycling defects. cellular senescence Homo sapiens RECQL5 Cooperates With Topoisomerase II Alpha in DNA Decatenation and Cell Cycle Progression 10.1093/nar/gkr844 unknown Unknown 7153 TOP2B DNA Topoisomerase II Beta; Topoisomerase (DNA) II Beta 180kDa; TOPIIB topoisomerase (DNA) II beta Enzymatically it catalyzes ATP-dependent topological changes of double stranded DNA, while as a protein it was reported to be associated with several factors in promoting cell growth, migration, DNA repair and transcription regulation. others Homo sapiens Topoisomerase IIβ and Its Role in Different Biological Contexts 10.1016/j.abb.2017.06.021 unknown Unknown 7155 TOP3B DNA Topoisomerase III Beta; TOP3B1; Topoisomerase (DNA) III Beta topoisomerase (DNA) III beta Mice lacking DNA topoisomerase 3beta are predisposed to a shortened lifespan, infertility, and lesions in multiple organs resulting from inflammatory responses. altered intercellular communication Homo sapiens Topoisomerase 3β is the major topoisomerase for mRNAs and linked to neurodevelopment and mental dysfunction 10.1093/nar/gkw1293 unknown Unknown 8940 TOPORS Topoisomerase I-Binding RING Finger Protein E3 ubiquitin-protein ligase Topors TOPORS functions as an E3 ubiquitin-protein ligase and as an E3 SUMO1-protein ligase. TOPORS may regulate chromatin modification through sumoylation of several chromatin modification-associated proteins. TOPORS may be involved in DNA damage-induced cell death through IKBKE sumoylation. loss of proteostasis Homo sapiens Topors functions as an E3 ubiquitin ligase with specific E2 enzymes and ubiquitinates p53 10.1074/jbc.C400300200 unknown Unknown 10210 TP53 BMFS5; TRP53 tumor protein p53 TP53 acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. TP53 is involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. others Homo sapiens Variation in the human TP53 gene affects old age survival and cancer mortality 10.1016/j.exger.2004.10.001 hsa04211 Longevity regulating pathway 7157 TP53BP1 TP53-Binding Protein 1 tumor protein p53 binding protein 1 Double-strand break (DSB) repair protein involved in response to DNA damage, telomere dynamics and class-switch recombination (CSR) during antibody genesis. TP53BP1 plays a key role in the repair of double-strand DNA breaks (DSBs) in response to DNA damage by promoting non-homologous end joining (NHEJ)-mediated repair of DSBs and specifically counteracting the function of the homologous recombination (HR) repair protein BRCA1. TP53BP1 participates in the repair and the orientation of the broken DNA ends during CSR. genomic instability Homo sapiens 53BP1, a Mediator of the DNA Damage Checkpoint 10.1126/science.1076182 unknown Unknown 7158 TP63 P73L; P63 tumor protein p63 TP63 acts as a sequence specific DNA binding transcriptional activator or repressor. TP63 may be required in conjunction with TP73/p73 for initiation of p53/TP53 dependent apoptosis in response to genotoxic insults and the presence of activated oncogenes. TP63 is involved in Notch signaling by probably inducing JAG1 and JAG2. TP63 plays a role in the regulation of epithelial morphogenesis. genomic instability Homo sapiens p63, a p53 Homolog at 3q27-29, Encodes Multiple Products With Transactivating, Death-Inducing, and Dominant-Negative Activities 10.1016/s1097-2765(00)80275-0 unknown Unknown 8626 TP73 P53-Like Transcription Factor tumor protein p73 TP73 participates in the apoptotic response to DNA damage. TP73 isoforms containing the transactivation domain are pro-apoptotic, isoforms lacking the domain are anti-apoptotic and block the function of p53 and transactivating p73 isoforms. TP73 may be a tumor suppressor protein. genomic instability Homo sapiens Human DeltaNp73 regulates a dominant negative feedback loop for TAp73 and p53 10.1189/jlb.1A0317-132R hsa04115 p53 signaling pathway 7161 TPP2 Tripeptidyl Aminopeptidase tripeptidyl peptidase II Component of the proteolytic cascade acting downstream of the 26S proteasome in the ubiquitin-proteasome pathway. TRAP1 may be able to complement the 26S proteasome function to some extent under conditions in which the latter is inhibited. loss of proteostasis Homo sapiens Generation of major histocompatibility complex class I antigens: functional interplay between proteasomes and TPPII 10.1038/ni1090 unknown Unknown 7174 TRADD Tumor Necrosis Factor Receptor Type 1 Associated Death Domain Protein TNFRSF1A Associated Via Death Domain The nuclear form acts as a tumor suppressor by preventing ubiquitination and degradation of isoform p19ARF/ARF of CDKN2A by TRIP12: acts by interacting with TRIP12, leading to disrupt interaction between TRIP12 and isoform p19ARF/ARF of CDKN2A (By similarity). Adapter molecule for TNFRSF1A/TNFR1 that specifically associates with the cytoplasmic domain of activated TNFRSF1A/TNFR1 mediating its interaction with FADD. Overexpression of TRADD leads to two major TNF-induced responses, apoptosis and activation of NF-kappa-B. NF-κB related gene Homo sapiens Modulating TRADD to restore cellular homeostasis and inhibit apoptosis 10.1038/s41586-020-2757-z hsa04064 NF-kappa B signaling pathway 8717 TRAF1 EBI6 TNF Receptor Associated Factor 1 Adapter molecule that regulates the activation of NF-kappa-B and JNK. Plays a role in the regulation of cell survival and apoptosis. The heterotrimer formed by TRAF1 and TRAF2 is part of a E3 ubiquitin-protein ligase complex that promotes ubiquitination of target proteins, such as MAP3K14. The TRAF1/TRAF2 complex recruits the antiapoptotic E3 protein-ubiquitin ligases BIRC2 and BIRC3 to TNFRSF1B/TNFR2. NF-κB related gene Homo sapiens Traf1 induction and protection from tumor necrosis factor by nuclear factor-kappaB p65 is independent of serine 536 phosphorylation 10.1158/0008-5472.CAN-07-0922 hsa04064 NF-kappa B signaling pathway 7185 TRAF2 TRAP3 TNF Receptor Associated Factor 2 Regulates activation of NF-kappa-B and JNK and plays a central role in the regulation of cell survival and apoptosis. Required for normal antibody isotype switching from IgM to IgG. Has E3 ubiquitin-protein ligase activity and promotes 'Lys-63'-linked ubiquitination of target proteins, such as BIRC3, RIPK1 and TICAM1. Is an essential constituent of several E3 ubiquitin-protein ligase complexes, where it promotes the ubiquitination of target proteins by bringing them into contact with other E3 ubiquitin ligases. Regulates BIRC2 and BIRC3 protein levels by inhibiting their autoubiquitination and subsequent degradation; this does not depend on the TRAF2 RING-type zinc finger domain. Plays a role in mediating activation of NF-kappa-B by EIF2AK2/PKR. In complex with BIRC2 or BIRC3, promotes ubiquitination of IKBKE. NF-κB related gene Homo sapiens Bone Remodeling and the Role of TRAF3 in Osteoclastic Bone Resorption 10.3389/fimmu.2018.02263 hsa04064 NF-kappa B signaling pathway 7186 TRAF3 LAP1 TNF Receptor Associated Factor 3 Regulates pathways leading to the activation of NF-kappa-B and MAP kinases, and plays a central role in the regulation of B-cell survival. Part of signaling pathways leading to the production of cytokines and interferon. Required for normal antibody isotype switching from IgM to IgG. Plays a role T-cell dependent immune responses. Plays a role in the regulation of antiviral responses. Is an essential constituent of several E3 ubiquitin-protein ligase complexes. May have E3 ubiquitin-protein ligase activity and promote 'Lys-63'-linked ubiquitination of target proteins. Inhibits activation of NF-kappa-B in response to LTBR stimulation. Inhibits TRAF2-mediated activation of NF-kappa-B. Down-regulates proteolytic processing of NFKB2, and thereby inhibits non-canonical activation of NF-kappa-B. Promotes ubiquitination and proteasomal degradation of MAP3K14. NF-κB related gene Homo sapiens Bone Remodeling and the Role of TRAF3 in Osteoclastic Bone Resorption 10.3389/fimmu.2018.02263 hsa04064 NF-kappa B signaling pathway 7187 TRAF6 RNF85 TNF Receptor Associated Factor 6 E3 ubiquitin ligase that, together with UBE2N and UBE2V1, mediates the synthesis of 'Lys-63'-linked-polyubiquitin chains conjugated to proteins, such as IKBKG, IRAK1, AKT1 and AKT2. Also mediates ubiquitination of free/unanchored polyubiquitin chain that leads to MAP3K7 activation. Leads to the activation of NF-kappa-B and JUN. May be essential for the formation of functional osteoclasts. Seems to also play a role in dendritic cells (DCs) maturation and/or activation. Represses c-Myb-mediated transactivation, in B-lymphocytes. Adapter protein that seems to play a role in signal transduction initiated via TNF receptor, IL-1 receptor and IL-17 receptor. Regulates osteoclast differentiation by mediating the activation of adapter protein complex 1 (AP-1) and NF-kappa-B, in response to RANK-L stimulation. Together with MAP3K8, mediates CD40 signals that activate ERK in B-cells and macrophages, and thus may play a role in the regulation of immunoglobulin production. NF-κB related gene Homo sapiens Gain-of-Function Mutation of Card14 Leads to Spontaneous Psoriasis-like Skin Inflammation through Enhanced Keratinocyte Response to IL-17A 10.1016/j.immuni.2018.05.012 hsa04064 NF-kappa B signaling pathway 7189 TRAP1 TNFR-Associated Protein 1 TNF receptor-associated protein 1 TRAP1 is a chaperone that expresses an ATPase activity. TRAP1 is involved in maintaining mitochondrial function and polarization, downstream of PINK1 and mitochondrial complex I. TRAP1 is a negative regulator of mitochondrial respiration able to modulate the balance between oxidative phosphorylation and aerobic glycolysis. mitochondrial dysfunction Homo sapiens e mitochondrial chaperone TRAP1 promotes neoplastic growth by inhibiting succinate dehydrogenase 10.1016/j.cmet.2013.04.019 unknown Unknown 10131 TRIM25 RNF147 Tripartite Motif Containing 25 unctions as a ubiquitin E3 ligase and as an ISG15 E3 ligase . Involved in innate immune defense against viruses by mediating ubiquitination of DDX58 and IFIH1. Mediates 'Lys-63'-linked polyubiquitination of the DDX58 N-terminal CARD-like region and may play a role in signal transduction that leads to the production of interferons in response to viral infection . Mediates 'Lys-63'-linked polyubiquitination of IFIH1 . Promotes ISGylation of 14-3-3 sigma (SFN), an adapter protein implicated in the regulation of a large spectrum signaling pathway . Mediates estrogen action in various target organs . Mediates the ubiquitination and subsequent proteasomal degradation of ZFHX3 . NF-κB related gene Homo sapiens TRIM25 has a dual function in the p53/Mdm2 circuit 10.1038/onc.2015.21 hsa04064 NF-kappa B signaling pathway 7706 TRPS1 GC79 Transcriptional Repressor GATA Binding 1 Transcriptional repressor. Binds specifically to GATA sequences and represses expression of GATA-regulated genes at selected sites and stages in vertebrate development. Regulates chondrocyte proliferation and differentiation. Executes multiple functions in proliferating chondrocytes, expanding the region of distal chondrocytes, activating proliferation in columnar cells and supporting the differentiation of columnar into hypertrophic chondrocytes. others Homo sapiens The RING finger protein RNF4, a co-regulator of transcription, interacts with the TRPS1 transcription factor. 10.1074/jbc.M306259200 unknown Unknown 7227 TRPV1 Vanilloid Receptor Subtype 1 transient receptor potential cation channel subfamily V member 1 TRPV1 is involved in mediation of inflammatory pain and hyperalgesia. TRPV1 is sensitized by a phosphatidylinositol second messenger system activated by receptor tyrosine kinases, which involves PKC isozymes and PCL. TRPV1 can be activated by endogenous compounds, including 12-hydroperoxytetraenoic acid and bradykinin. TRPV1 acts as ionotropic endocannabinoid receptor with central neuromodulatory effects. others Homo sapiens Molecular Determinants of Vanilloid Sensitivity in TRPV1 10.1074/jbc.M312577200 unknown Unknown 7442 TSC1 Tuberous Sclerosis 1 Hamartin In complex with TSC2, TSC1 inhibits the nutrient-mediated or growth factor-stimulated phosphorylation of S6K1 and EIF4EBP1 by negatively regulating mTORC1 signaling. TSC1 is involved in microtubule-mediated protein transport, but this seems to be due to unregulated mTOR signaling. TSC1 acts as a co-chaperone for HSP90AA1 facilitating HSP90AA1 chaperoning of protein clients such as kinases, TSC2 and glucocorticoid receptor NR3C1. deregulated nutrient sensing Homo sapiens Tuberous sclerosis complex-1 and -2 gene products function together to inhibit mammalian target of rapamycin (mTOR)-mediated downstream signaling 10.1073/pnas.202476899 hsa04211 Longevity regulating pathway 7248 TSC2 Tuberous Sclerosis 2 Tuberin In complex with TSC1, this tumor suppressor inhibits the nutrient-mediated or growth factor-stimulated phosphorylation of S6K1 and EIF4EBP1 by negatively regulating mTORC1 signaling. TSC2 acts as a GTPase-activating protein (GAP) for the small GTPase RHEB, a direct activator of the protein kinase activity of mTORC1. TSC2 may also play a role in microtubule-mediated protein transport. deregulated nutrient sensing Homo sapiens Tuberous sclerosis complex-1 and -3 gene products function together to inhibit mammalian target of rapamycin (mTOR)-mediated downstream signaling 10.1073/pnas.202476900 hsa04211 Longevity regulating pathway 7249 TXN TRDX; ADF thioredoxin TXN participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions. others Homo sapiens The role of thioredoxin in the aging process: involvement of oxidative stress 10.1089/152308603770310211 unknown Unknown 7295 UBB HEL-S-50 ubiquitin B UBB exists either covalently attached to another protein, or free (unanchored). loss of proteostasis Homo sapiens Long-term Proteasomal Inhibition in Transgenic Mice by UBB(+1) Expression Results in Dysfunction of Central Respiration Control Reminiscent of Brainstem Neuropathology in Alzheimer Patients 10.1007/s00401-012-1003-7 hsa04137 Mitophagy - animal 7314 UBE2I UBC9 ubiquitin-conjugating enzyme E2I UBE2I catalyzes the attachment of SUMO1 to other proteins. It is related to PCNA, suggesting it might play a role in DNA repair and perhaps even in aging. genomic instability Homo sapiens RAD6-dependent DNA Repair Is Linked to Modification of PCNA by Ubiquitin and SUMO 10.1038/nature00991 unknown Unknown 7329 UCHL1 PGP9.5; Uch-L1; PARK5 ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) UCHL1 has both ligase and hydrolase activities, and it may be involved in protein degradation. loss of proteostasis Homo sapiens The Neuron-Specific Protein PGP 9.5 Is a Ubiquitin Carboxyl-Terminal Hydrolase 10.1126/science.2530630 unknown Unknown 7345 UCP1 Mitochondrial Brown Fat Uncoupling Protein 1 uncoupling protein 1 (mitochondrial, proton carrier) UCP1 functions as a long-chain fatty acid/LCFA and proton symporter, simultaneously transporting one LCFA and one proton through the inner mitochondrial membrane. However, LCFAs remaining associated with the transporter via their hydrophobic tails, it results in an apparent transport of protons activated by LCFAs. UCP1 regulates the production of reactive oxygen species/ROS by mitochondria. mitochondrial dysfunction Homo sapiens Expression, folding, and proton transport activity of human uncoupling protein-1 (UCP1) in lipid membranes: evidence for associated functional forms 10.1074/jbc.M113.509935 unknown Unknown 7350 UCP2 Mitochondrial Uncoupling Protein 2; Solute Carrier Family 25 Member 8 uncoupling protein 2 (mitochondrial, proton carrier) UCP are mitochondrial transporter proteins that create proton leaks across the inner mitochondrial membrane, thus uncoupling oxidative phosphorylation from ATP synthesis. As a result, energy is dissipated in the form of heat. mitochondrial dysfunction Homo sapiens UCP2 transports C4 metabolites out of mitochondria, regulating glucose and glutamine oxidation https://doi.org/10.1073/pnas.1317400111 unknown Unknown 7351 UCP3 SLC25A9 uncoupling protein 3 (mitochondrial, proton carrier) Mitochondrial uncoupling proteins create proton leaks across the inner mitochondrial membrane to uncouple oxidative phosphorylation from ATP synthesis resulting in energy being dissipated as heat. mitochondrial dysfunction Homo sapiens Energy Metabolism in Uncoupling Protein 3 Gene Knockout Mice 10.1074/jbc.M910179199 unknown Unknown 7352 ULK1 Serine/Threonine-Protein Kinase ULK1 Serine/threonine-protein kinase ULK1 ULK1 acts upstream of phosphatidylinositol 3-kinase PIK3C3 to regulate the formation of autophagophores, the precursors of autophagosomes. ULK1 is part of regulatory feedback loops in autophagy: acts both as a downstream effector and negative regulator of mammalian target of rapamycin complex 1 (mTORC1) via interaction with RPTOR. ULK1 is activated via phosphorylation by AMPK and also acts as a regulator of AMPK by mediating phosphorylation of AMPK subunits PRKAA1, PRKAB2 and PRKAG1, leading to negatively regulate AMPK activity. others Homo sapiens Interaction of the Unc-51-like kinase and microtubule-associated protein light chain 3 related proteins in the brain: possible role of vesicular transport in axonal elongation 10.1016/s0169-328x(00)00218-7 hsa04211 Longevity regulating pathway 8408 VCAM1 CD106 Vascular Cell Adhesion Molecule 1 mportant in cell-cell recognition. Appears to function in leukocyte-endothelial cell adhesion. Interacts with integrin alpha-4/beta-1 (ITGA4/ITGB1) on leukocytes, and mediates both adhesion and signal transduction. The VCAM1/ITGA4/ITGB1 interaction may play a pathophysiologic role both in immune responses and in leukocyte emigration to sites of inflammation. NF-κB related gene Homo sapiens Aged blood impairs hippocampal neural precursor activity and activates microglia via brain endothelial cell VCAM1 10.1038/s41591-019-0440-4 hsa04064 NF-kappa B signaling pathway 7412 VCP TERA; P97 valosin containing protein VCP is necessary for the fragmentation of Golgi stacks during mitosis and for their reassembly after mitosis. VCP is involved in the formation of the transitional endoplasmic reticulum (tER). loss of proteostasis Homo sapiens VCP and PSMF1: Antagonistic Regulators of Proteasome Activity 10.1016/j.bbrc.2015.06.086 unknown Unknown 7415 VEGFA VEGF-A vascular endothelial growth factor A Growth factor active in angiogenesis, vasculogenesis and endothelial cell growth. VEGFA induces endothelial cell proliferation, promotes cell migration, inhibits apoptosis and induces permeabilization of blood vessels. VEGFA binds to the FLT1/VEGFR1 and KDR/VEGFR2 receptors, heparan sulfate and heparin. others Homo sapiens Vascular endothelial growth factor induces cyclooxygenase-dependent proliferation of endothelial cells via the VEGF-2 receptor 10.1096/fj.00-0757fje hsa04066 HIF-1 signaling pathway 7422 VEGFC Flt4-L Vascular Endothelial Growth Factor C Growth factor active in angiogenesis, and endothelial cell growth, stimulating their proliferation and migration and also has effects on the permeability of blood vessels. May function in angiogenesis of the venous and lymphatic vascular systems during embryogenesis, and also in the maintenance of differentiated lymphatic endothelium in adults. Binds and activates KDR/VEGFR2 and FLT4/VEGFR3 receptors. senescence-associated secretory phenotype Homo sapiens Signatures of photo-aging and intrinsic aging in skin were revealed by transcriptome network analysis 10.18632/aging.101496 hsa04010 MAPK signaling pathway 7424 WNT2 IRP Wnt Family Member Ligand for members of the frizzled family of seven transmembrane receptors. Functions in the canonical Wnt signaling pathway that results in activation of transcription factors of the TCF/LEF family (PubMed:20018874). Functions as upstream regulator of FGF10 expression. Plays an important role in embryonic lung development. May contribute to embryonic brain development by regulating the proliferation of dopaminergic precursors and neurons (By similarity). senescence-associated secretory phenotype Homo sapiens SERPINH1 regulates EMT and gastric cancer metastasis via the Wnt/β-catenin signaling pathway 10.18632/aging.102831 hsa04150 mTOR signaling pathway 7472 WRN RECQL2; RECQ3 Werner syndrome, RecQ helicase-like Multifunctional enzyme that has both magnesium and ATP-dependent DNA-helicase activity and 3'->5' exonuclease activity towards double-stranded DNA with a 5'-overhang. genomic instability Homo sapiens Aging Stem Cells. A Werner Syndrome Stem Cell Model Unveils Heterochromatin Alterations as a Driver of Homo sapiens Aging 10.1126/science.aaa1356 unknown Unknown 7486 XIAP IAP-Like Protein 1 X-Linked Inhibitor Of Apoptosis Multi-functional protein which regulates not only caspases and apoptosis, but also modulates inflammatory signaling and immunity, copper homeostasis, mitogenic kinase signaling, cell proliferation, as well as cell invasion and metastasis. Acts as a direct caspase inhibitor. Directly bind to the active site pocket of CASP3 and CASP7 and obstructs substrate entry. Inactivates CASP9 by keeping it in a monomeric, inactive state. Acts as an E3 ubiquitin-protein ligase regulating NF-kappa-B signaling and the target proteins for its E3 ubiquitin-protein ligase activity include: RIPK1, CASP3, CASP7, CASP8, CASP9, MAP3K2/MEKK2, DIABLO/SMAC, AIFM1, CCS and BIRC5/survivin. Ubiquitinion of CCS leads to enhancement of its chaperone activity toward its physiologic target, SOD1, rather than proteasomal degradation. Ubiquitinion of MAP3K2/MEKK2 and AIFM1 does not lead to proteasomal degradation. NF-κB related gene Homo sapiens Elevated X-linked inhibitor of apoptosis protein (XIAP) expression uncovers detrimental prognosis in subgroups of neoadjuvant treated and T-cell rich esophageal adenocarcinoma 10.1186/s12885-019-5722-1 hsa04064 NF-kappa B signaling pathway 331 XPA XPAC; XP1 xeroderma pigmentosum, complementation group A XPA is primarily involved in DNA repair. The XPA protein functions in the recognition of DNA damage. genomic instability Homo sapiens Xeroderma Pigmentosa Group A (XPA), Nucleotide Excision Repair and Regulation by ATR in Response to Ultraviolet Irradiation 10.1007/978-3-319-56017-5_4 unknown Unknown 7507 XRCC5 KU80; KARP-1; Ku86 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) The DNA repair protein Ku (a heterodimer of Ku70 and Ku80 subunits) associates with mammalian telomeres and contributes to telomere maintenance. telomere attrition Homo sapiens Human Ku70/80 Associates Physically With Telomerase Through Interaction With hTERT 10.1074/jbc.M208542200 unknown Unknown 7520 XRCC6 KU70; ML8; G22P1 X-ray repair complementing defective repair in Chinese hamster cells 6 Ku70 forms a heterodimer with Ku80, called Ku, that is critical for repairing DNA double-stand breaks by nonhomologous end joining and for maintaining telomeres. The Ku heterodimer is important for longevity assurance in mice. others Homo sapiens Human Ku70/80 associates physically with telomerase through interaction with hTERT 10.1074/jbc.M208542200 unknown Unknown 2547 YWHAZ KCIP-1; 14-3-3-zeta; YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta YWHAZ interacts with so many proteins, including many associated with ageing such as the?INS/IGF1?pathway, may be involved in stem cell development. stem cell exhaustion Homo sapiens Proteomic Analysis Identifies That 14-3-3zeta Interacts With Beta-Catenin and Facilitates Its Activation by Akt 10.1073/pnas.0406499101 hsa04110 Cell cycle 7534 ZAP70 SRK Zeta Chain Of T Cell Receptor Associated Protein Kinase 70 Tyrosine kinase that plays an essential role in regulation of the adaptive immune response. Regulates motility, adhesion and cytokine expression of mature T-cells, as well as thymocyte development. Contributes also to the development and activation of primary B-lymphocytes. When antigen presenting cells (APC) activate T-cell receptor (TCR), a serie of phosphorylations lead to the recruitment of ZAP70 to the doubly phosphorylated TCR component CD247/CD3Z through ITAM motif at the plasma membrane. This recruitment serves to localization to the stimulated TCR and to relieve its autoinhibited conformation. Release of ZAP70 active conformation is further stabilized by phosphorylation mediated by LCK. NF-κB related gene Homo sapiens Otud7b facilitates T cell activation and inflammatory responses by regulating Zap70 ubiquitination 10.1084/jem.20151426 hsa04064 NF-kappa B signaling pathway 7535 ZMPSTE24 FACE-1; Ste24p; STE24 zinc metallopeptidase STE24 ZMPSTE24 is a zinc metalloprotease involved in the post-translational processing of?LMNA?precursors. ZMPSTE24-null mice have a short lifespan and show some signs of accelerated ageing. genomic instability Homo sapiens Loss of ZMPSTE24 (FACE-1) Causes Autosomal Recessive Restrictive Dermopathy and Accumulation of Lamin A Precursors 10.1093/hmg/ddi159 unknown Unknown 10269